CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM10G00640
(
Oryza glumaepatula
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
OGLUM10G00640
T024671_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM10G00640.1
BBR
54
339
MNDDASMSSMGLRGWGAFYEPPARNLGLQLMSSVPADRDTKHLLSATPFLHHHQHQQHVPHHHHQPHHPRDCGTNANANGNGNGVGYGMMLATHTLRMLQHQPEPQPQLQHPPSPPHPKEECISPPLMEENVPVKPPPPKKRQQGKQPKVPRPKKPKKPAAPREDGAPPSAPAPRRRGPRKNIGMVINGIDLDLSRIPTRICSCTGAPQQCYRWGAGGWQSACCTTTVSTYPLPMSMKRRGARIAGRKMSHGAFKKVLEKLASEGYNLNNPIDLKTFWAKHGTNKE
Links
Other
BBR
family TFs
Other
Oryza glumaepatula
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI10G00650
Oryza rufipogon
ORUFI10G00650
N
0.968
OS10G0115500
Oryza sativa
OS10G0115500
N
0.958
OMERI10G00690
Oryza meridionalis
OMERI10G00690
N
0.908
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.857
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.848
ONIVA10G01090
Oryza nivara
ONIVA10G01090
N
0.777
OBART10G00640
Oryza barthii
OBART10G00640
N
0.769
ONIVA10G01080
Oryza nivara
ONIVA10G01080
N
0.765
OLONG_022525
Oryza longistaminata
OLONG_022525
N
0.764
ORUFI10G00640
Oryza rufipogon
ORUFI10G00640
N
0.759
OS10G0114500
Oryza sativa
OS10G0114500
N
0.759
OS10G0115200
Oryza sativa
OS10G0115200
N
0.759
OBART10G00650
Oryza barthii
OBART10G00650
N
0.757
BGIOSGA032378
Oryza indica
BGIOSGA032378
N
0.756
BGIOSGA032380
Oryza indica
BGIOSGA032380
N
0.756
OGLUM10G00620
Oryza glumaepatula
OGLUM10G00620
N
0.746
OGLUM10G00630
Oryza glumaepatula
OGLUM10G00630
N
0.742
OB10G10530
Oryza brachyantha
OB10G10530
N
0.721
OPUNC10G00600
Oryza punctata
OPUNC10G00600
N
0.717
OB10G10650
Oryza brachyantha
OB10G10650
N
0.712
LPERR10G00500
Leersia perrieri
LPERR10G00500
N
0.711
OPUNC03G13410
Oryza punctata
OPUNC03G13410
N
0.709
LPERR10G00510
Leersia perrieri
LPERR10G00510
N
0.708
OS03G0237401
Oryza sativa
OS03G0237401
N
0.706