CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC10G00600
(
Oryza punctata
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
OPUNC10G00600
T024683_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC10G00600.1
BBR
79
427
MDDDASMSMRWGGFFESPARNLGLQLMSSVPADRDTKQLLSATPFLHHQNHQQHVPHHHHQPHHPRDCGGNGNGNGGGVPNGGAMPPPPATEAPPSVAMNFVRNDMWMHPQQQQHHHHPREHKVLHNLTVGHSSSHIAHHDPLGYGMIPGTHSAHTLQMMQQTEPQQQPPPPPQQPKEECISSPLIEENVPVIDEPPPPKKRQQGRQPKVPRAKKPKKSAPPREDGAPNAPAPRRRGPRKNIGMVINGIDLDLSRIPTPICSCTGAPQQCYRWGAGGWQSACCTTTISTYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Oryza punctata
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
1.000
OPUNC03G13410
Oryza punctata
OPUNC03G13410
N
0.917
OGLUM10G00620
Oryza glumaepatula
OGLUM10G00620
N
0.914
OGLUM10G00630
Oryza glumaepatula
OGLUM10G00630
N
0.914
BGIOSGA032380
Oryza indica
BGIOSGA032380
N
0.913
ORUFI10G00640
Oryza rufipogon
ORUFI10G00640
N
0.910
OS10G0114500
Oryza sativa
OS10G0114500
N
0.910
OS10G0115200
Oryza sativa
OS10G0115200
N
0.910
ONIVA10G01080
Oryza nivara
ONIVA10G01080
N
0.909
BGIOSGA032378
Oryza indica
BGIOSGA032378
N
0.903
OBART10G00640
Oryza barthii
OBART10G00640
N
0.897
OLONG_022525
Oryza longistaminata
OLONG_022525
N
0.880
LPERR10G00510
Leersia perrieri
LPERR10G00510
N
0.856
LPERR10G00500
Leersia perrieri
LPERR10G00500
N
0.852
OB10G10530
Oryza brachyantha
OB10G10530
N
0.838
OB10G10650
Oryza brachyantha
OB10G10650
N
0.838
OMERI10G00690
Oryza meridionalis
OMERI10G00690
N
0.812
BRADI3G21380
Brachypodium distachyon
BRADI3G21380
N
0.745
OS03G0237401
Oryza sativa
OS03G0237401
N
0.735
OBART10G00650
Oryza barthii
OBART10G00650
N
0.733
BRADI3G21390
Brachypodium distachyon
BRADI3G21390
N
0.731
ORUFI10G00650
Oryza rufipogon
ORUFI10G00650
N
0.731
OS10G0115500
Oryza sativa
OS10G0115500
N
0.728
Si036337m.g
Setaria italica
Si036337m.g
N
0.728
MLOC_13459
Hordeum vulgare
MLOC_13459
N
0.720
OGLUM10G00640
Oryza glumaepatula
OGLUM10G00640
N
0.717
Traes_4AS_48979CBE1
Triticum aestivum
Traes_4AS_48979CBE1
N
0.712
Pavir.Ia04968
Panicum virgatum
Pavir.Ia04968
N
0.710
F775_06914
Aegilops tauschii
F775_06914
N
0.708
Traes_4DL_AE5093871
Triticum aestivum
Traes_4DL_AE5093871
N
0.708