CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_13459
(
Hordeum vulgare
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
MLOC_13459
T024652_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_13459.1
BBR
1
268
MDDDGSLSIRNWGFYETMKGNLGLQLMPSVTGGHRDTKPLLPNGTFLQHHTPPHHPPHSHHPRDYGNGEPSGGMPAEPPAIHMDFVRNEAWMHPSQHQHQHQHQHQHQHQHQHQLQHQHQHQHSRELKVLNAVPVGPAPHIGHPGHAVHHHPTGFGMMPDARGAHTLQMMQPQEPPVPDEEKITPPLVEDHSVVGSKPPVKKRQQGRQPKVPKPKKPKKDATPGEDGAPKARAPRSRGPLKPVEMVINGIDFDISRIPTPVCSCMGGK
MLOC_13459.2
BBR
1
350
MDDDGSLSIRNWGFYETMKGNLGLQLMPSVTGGHRDTKPLLPNGTFLQHHTPPHHPPHSHHPRDYGNGEPSGGMPAEPPAIHMDFVRNEAWMHPSQHQHQHQHQHQHQHQHQHQLQHQHQHQHSRELKVLNAVPVGPAPHIGHPGHAVHHHPTGFGMMPDARGAHTLQMMQPQEPPVPDEEKITPPLVEDHSVVGSKPPVKKRQQGRQPKVPKPKKPKKDATPGEDGAPKARAPRSRGPLKPVEMVINGIDFDISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR
MLOC_13459.3
BBR
1
350
MDDDGSLSIRNWGFYETMKGNLGLQLMPSVTGGHRDTKPLLPNGTFLQHHTPPHHPPHSHHPRDYGNGEPSGGMPAEPPAIHMDFVRNEAWMHPSQHQHQHQHQHQHQHQHQHQLQHQHQHQHSRELKVLNAVPVGPAPHIGHPGHAVHHHPTGFGMMPDARGAHTLQMMQPQEPPVPDEEKITPPLVEDHSVVGSKPPVKKRQQGRQPKVPKPKKPKKDATPGEDGAPKARAPRSRGPLKPVEMVINGIDFDISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Hordeum vulgare
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_4AS_48979CBE1
Triticum aestivum
Traes_4AS_48979CBE1
N
0.954
F775_06914
Aegilops tauschii
F775_06914
N
0.947
Traes_4DL_AE5093871
Triticum aestivum
Traes_4DL_AE5093871
N
0.947
Si036337m.g
Setaria italica
Si036337m.g
N
0.805
Pavir.Ia04968
Panicum virgatum
Pavir.Ia04968
N
0.794
Si029480m.g
Setaria italica
Si029480m.g
N
0.780
Sb10g004880
Sorghum bicolor
Sb10g004880
N
0.752
GRMZM2G164735
Zea mays
GRMZM2G164735
N
0.741
Sb02g009750
Sorghum bicolor
Sb02g009750
N
0.731
Sb02g009782
Sorghum bicolor
Sb02g009782
N
0.731
Pavir.Ba02367
Panicum virgatum
Pavir.Ba02367
N
0.727
OPUNC03G13410
Oryza punctata
OPUNC03G13410
N
0.723
Pavir.J31488
Panicum virgatum
Pavir.J31488
N
0.723
OPUNC10G00600
Oryza punctata
OPUNC10G00600
N
0.720
GRMZM2G179366
Zea mays
GRMZM2G179366
N
0.715
Pavir.Bb00953
Panicum virgatum
Pavir.Bb00953
N
0.713
LPERR10G00510
Leersia perrieri
LPERR10G00510
N
0.709
LPERR10G00500
Leersia perrieri
LPERR10G00500
N
0.706
OB10G10650
Oryza brachyantha
OB10G10650
N
0.706
BGIOSGA032378
Oryza indica
BGIOSGA032378
N
0.702
BRADI3G21380
Brachypodium distachyon
BRADI3G21380
N
0.702
BRADI3G21390
Brachypodium distachyon
BRADI3G21390
N
0.702
OB10G10530
Oryza brachyantha
OB10G10530
N
0.702
OGLUM10G00620
Oryza glumaepatula
OGLUM10G00620
N
0.702
ONIVA10G01080
Oryza nivara
ONIVA10G01080
N
0.702