CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb02g009750
(
Sorghum bicolor
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Sb02g009750
T024726_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb02g009750.1
BBR
1
349
MDDDDGSLGIRNWGFYDTVKGNLGLQLMSSAPPDRDTKSLLPNGAFLQHHGHHNAPHQLHMQHSLHSRGPAGGRASGGMPTESQPIHMDFSRNEAWLHQPHHHQRPREQRVLHSRPIGPDGHVGHPGYGGHPAHGGHIVHHHPTGYEMISDAQHTLQMMQPQLETQLQEPPPCKEEEAPPPLIEDHTAVSTGPPVKKRQRGRQQNRQPKSPKPKKPKKAAVPVEDGAPNGHAPRRRGPKKTVGMVINGIELDLANIPTPVCSCTGSPQQCYRWGAGGWQSACCTTSISMYPLPMSTKRRGARISGRKMSHGAFKKVLEKLAGEGYNLANPINLKTFWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Sorghum bicolor
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Sb02g009782
Sorghum bicolor
Sb02g009782
N
1.000
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.952
Sb10g004880
Sorghum bicolor
Sb10g004880
N
0.919
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.889
GRMZM2G164735
Zea mays
GRMZM2G164735
N
0.859
GRMZM2G179366
Zea mays
GRMZM2G179366
N
0.845
Si029480m.g
Setaria italica
Si029480m.g
N
0.810
Si036337m.g
Setaria italica
Si036337m.g
N
0.779
Pavir.J31488
Panicum virgatum
Pavir.J31488
N
0.768
GRMZM2G166230
Zea mays
GRMZM2G166230
N
0.765
OS03G0237401
Oryza sativa
OS03G0237401
N
0.765
Pavir.Ia04968
Panicum virgatum
Pavir.Ia04968
N
0.759
Pavir.Ba02367
Panicum virgatum
Pavir.Ba02367
N
0.756
Pavir.Bb00953
Panicum virgatum
Pavir.Bb00953
N
0.755
Traes_4AS_48979CBE1
Triticum aestivum
Traes_4AS_48979CBE1
N
0.737
F775_06914
Aegilops tauschii
F775_06914
N
0.733
Traes_4DL_AE5093871
Triticum aestivum
Traes_4DL_AE5093871
N
0.733
MLOC_13459
Hordeum vulgare
MLOC_13459
N
0.731