CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_4AS_48979CBE1
(
Triticum aestivum
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Traes_4AS_48979CBE1
T024758_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_4AS_48979CBE1.2
BBR
1
348
MDDDGSLSIRNWGFYETMKGNLGLQLMPSVAGGHRDTKPLLPNGTFLQHHNALHHPPHSHHPRDYGNGEPSGGMPTEPPAIHMDFVRNEAWMHPSQHQHQQQHQHHHQNQHQQQHQHQHQHSREQKVLHAVPLGPAGHIGHPGHAVHHHPTGFGMMPDARGAHTLQMMQPQEPPVPEEEKIAPPLVEEHSVVGSKPPVKKRQQGRQPKLPKPKKPKKVATPGEDGAPKARAPRSRGPLKPVEMVINGIDFDISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Triticum aestivum
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_06914
Aegilops tauschii
F775_06914
N
0.989
Traes_4DL_AE5093871
Triticum aestivum
Traes_4DL_AE5093871
N
0.989
MLOC_13459
Hordeum vulgare
MLOC_13459
N
0.954
Si036337m.g
Setaria italica
Si036337m.g
N
0.811
Pavir.Ia04968
Panicum virgatum
Pavir.Ia04968
N
0.801
Si029480m.g
Setaria italica
Si029480m.g
N
0.786
Sb10g004880
Sorghum bicolor
Sb10g004880
N
0.758
GRMZM2G164735
Zea mays
GRMZM2G164735
N
0.747
Sb02g009750
Sorghum bicolor
Sb02g009750
N
0.737
Sb02g009782
Sorghum bicolor
Sb02g009782
N
0.737
Pavir.Ba02367
Panicum virgatum
Pavir.Ba02367
N
0.737
OPUNC03G13410
Oryza punctata
OPUNC03G13410
N
0.730
Pavir.J31488
Panicum virgatum
Pavir.J31488
N
0.730
Pavir.Bb00953
Panicum virgatum
Pavir.Bb00953
N
0.719
GRMZM2G179366
Zea mays
GRMZM2G179366
N
0.718
BRADI3G21380
Brachypodium distachyon
BRADI3G21380
N
0.712
OB10G10530
Oryza brachyantha
OB10G10530
N
0.712
OPUNC10G00600
Oryza punctata
OPUNC10G00600
N
0.712
BRADI3G21390
Brachypodium distachyon
BRADI3G21390
N
0.708
BGIOSGA032378
Oryza indica
BGIOSGA032378
N
0.705
OGLUM10G00620
Oryza glumaepatula
OGLUM10G00620
N
0.705
ONIVA10G01080
Oryza nivara
ONIVA10G01080
N
0.705
BGIOSGA032380
Oryza indica
BGIOSGA032380
N
0.701
LPERR10G00510
Leersia perrieri
LPERR10G00510
N
0.701
OBART10G00640
Oryza barthii
OBART10G00640
N
0.701
OGLUM10G00630
Oryza glumaepatula
OGLUM10G00630
N
0.701