Pavir.Bb00953 (Panicum virgatum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Pavir.Bb00953 T024883_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb00953.1.p BBR 133 468

Links

Other BBR family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
Pavir.J31488 Panicum virgatum Pavir.J31488 N 0.965
Pavir.Ba02367 Panicum virgatum Pavir.Ba02367 N 0.902
Si029480m.g Setaria italica Si029480m.g N 0.843
GRMZM2G164735 Zea mays GRMZM2G164735 N 0.771
Sb10g004880 Sorghum bicolor Sb10g004880 N 0.771
Sb02g009750 Sorghum bicolor Sb02g009750 N 0.755
Sb02g009782 Sorghum bicolor Sb02g009782 N 0.755
GRMZM2G179366 Zea mays GRMZM2G179366 N 0.746
Si036337m.g Setaria italica Si036337m.g N 0.741
Pavir.Ia04968 Panicum virgatum Pavir.Ia04968 N 0.741
Traes_4AS_48979CBE1 Triticum aestivum Traes_4AS_48979CBE1 N 0.719
MLOC_13459 Hordeum vulgare MLOC_13459 N 0.713
F775_06914 Aegilops tauschii F775_06914 N 0.712
Traes_4DL_AE5093871 Triticum aestivum Traes_4DL_AE5093871 N 0.712