CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si029480m.g
(
Setaria italica
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Si029480m.g
T024735_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si029480m
BBR
187
527
MDDDGNLSIRNWGFYDTMKGNLGLQLMSSVPADRDTKSLLPTSAFLQHHGHHNAPHQLHSHHSRDSGGGGGASGSMPTEPHSIHMDFSRNEAWLHPSHHQHPREQKVLHARPVGPAGHVGHPGHGGHPGHGGHAVHHHPTGYGMMPDAPHTLQMMQPQLPSQPQEPPPCKEDHVPTPPVEDHSVVRTEPPVKKRQQGRQPKSPKPKKPKKPAVPREDGAVNGHAPRGRGPRKTVGMVINGIELDLSNIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNAKRRGARIAGRKMSQGAFKKVLEKLVGEGYNLANPIDLKTFWAKHGTNKFVVIR
Links
Other
BBR
family TFs
Other
Setaria italica
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.929
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.905
Pavir.J31488
Panicum virgatum
Pavir.J31488
N
0.856
Pavir.Ba02367
Panicum virgatum
Pavir.Ba02367
N
0.843
Pavir.Bb00953
Panicum virgatum
Pavir.Bb00953
N
0.843
Sb10g004880
Sorghum bicolor
Sb10g004880
N
0.835
GRMZM2G164735
Zea mays
GRMZM2G164735
N
0.827
GRMZM2G179366
Zea mays
GRMZM2G179366
N
0.810
Sb02g009750
Sorghum bicolor
Sb02g009750
N
0.810
Sb02g009782
Sorghum bicolor
Sb02g009782
N
0.810
Traes_4AS_48979CBE1
Triticum aestivum
Traes_4AS_48979CBE1
N
0.786
MLOC_13459
Hordeum vulgare
MLOC_13459
N
0.780
F775_06914
Aegilops tauschii
F775_06914
N
0.779
Si036337m.g
Setaria italica
Si036337m.g
N
0.779
Traes_4DL_AE5093871
Triticum aestivum
Traes_4DL_AE5093871
N
0.779
Pavir.Ia04968
Panicum virgatum
Pavir.Ia04968
N
0.779
OS03G0237401
Oryza sativa
OS03G0237401
N
0.765
BGIOSGA032378
Oryza indica
BGIOSGA032378
N
0.701
OGLUM10G00630
Oryza glumaepatula
OGLUM10G00630
N
0.701
ONIVA10G01080
Oryza nivara
ONIVA10G01080
N
0.701
OB10G10530
Oryza brachyantha
OB10G10530
N
0.700