Pavir.Ba02367 (Panicum virgatum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Pavir.Ba02367 T024882_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba02367.1.p BBR 1 324

Links

Other BBR family TFs
Other Panicum virgatum TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.929
Pavir.J31488 Panicum virgatum Pavir.J31488 N 0.906
Pavir.Bb00953 Panicum virgatum Pavir.Bb00953 N 0.902
Si029480m.g Setaria italica Si029480m.g N 0.843
Sb10g004880 Sorghum bicolor Sb10g004880 N 0.789
GRMZM2G164735 Zea mays GRMZM2G164735 N 0.775
OS03G0237401 Oryza sativa OS03G0237401 N 0.765
Sb02g009750 Sorghum bicolor Sb02g009750 N 0.756
Sb02g009782 Sorghum bicolor Sb02g009782 N 0.756
GRMZM2G179366 Zea mays GRMZM2G179366 N 0.750
Pavir.Ia04968 Panicum virgatum Pavir.Ia04968 N 0.749
Si036337m.g Setaria italica Si036337m.g N 0.746
Traes_4AS_48979CBE1 Triticum aestivum Traes_4AS_48979CBE1 N 0.737
F775_06914 Aegilops tauschii F775_06914 N 0.730
Traes_4DL_AE5093871 Triticum aestivum Traes_4DL_AE5093871 N 0.730
MLOC_13459 Hordeum vulgare MLOC_13459 N 0.727