Pavir.J31488 (Panicum virgatum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Pavir.J31488 T024889_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J31488.1.p BBR 1 342

Links

Other BBR family TFs
Other Panicum virgatum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
Pavir.Bb00953 Panicum virgatum Pavir.Bb00953 N 0.965
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.939
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.929
Pavir.Ba02367 Panicum virgatum Pavir.Ba02367 N 0.906
Si029480m.g Setaria italica Si029480m.g N 0.856
Sb10g004880 Sorghum bicolor Sb10g004880 N 0.782
GRMZM2G164735 Zea mays GRMZM2G164735 N 0.782
Sb02g009782 Sorghum bicolor Sb02g009782 N 0.768
Sb02g009750 Sorghum bicolor Sb02g009750 N 0.768
OS03G0237401 Oryza sativa OS03G0237401 N 0.765
GRMZM2G179366 Zea mays GRMZM2G179366 N 0.764
GRMZM2G166230 Zea mays GRMZM2G166230 N 0.760
Pavir.Ia04968 Panicum virgatum Pavir.Ia04968 N 0.745
Si036337m.g Setaria italica Si036337m.g N 0.745
Traes_4AS_48979CBE1 Triticum aestivum Traes_4AS_48979CBE1 N 0.730
MLOC_13459 Hordeum vulgare MLOC_13459 N 0.723
Traes_4DL_AE5093871 Triticum aestivum Traes_4DL_AE5093871 N 0.722
F775_06914 Aegilops tauschii F775_06914 N 0.722