CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GRMZM2G166230
(
Zea mays
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
GRMZM2G166230
T024620_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G166230_P01
BBR
2
184
DITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMVINGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGYNLANPIDLKTFWAKHGTNKFVTIR
GRMZM2G166230_P02
BBR
2
184
DITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMVINGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGYNLANPIDLKTFWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Zea mays
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.952
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.939
OS03G0237401
Oryza sativa
OS03G0237401
N
0.765
Sb02g009750
Sorghum bicolor
Sb02g009750
N
0.765
Sb02g009782
Sorghum bicolor
Sb02g009782
N
0.765
Pavir.J31488
Panicum virgatum
Pavir.J31488
N
0.760
BGIOSGA032378
Oryza indica
BGIOSGA032378
N
0.710
OB10G10650
Oryza brachyantha
OB10G10650
N
0.710
ONIVA10G01080
Oryza nivara
ONIVA10G01080
N
0.710
BRADI3G21390
Brachypodium distachyon
BRADI3G21390
N
0.705
OBART10G00640
Oryza barthii
OBART10G00640
N
0.705
OGLUM10G00620
Oryza glumaepatula
OGLUM10G00620
N
0.705
OGLUM10G00630
Oryza glumaepatula
OGLUM10G00630
N
0.705
ORUFI10G00640
Oryza rufipogon
ORUFI10G00640
N
0.705
OS10G0114500
Oryza sativa
OS10G0114500
N
0.705
OS10G0115200
Oryza sativa
OS10G0115200
N
0.705