CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI10G00690
(
Oryza meridionalis
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
OMERI10G00690
T024677_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI10G00690.1
BBR
1
238
MWMHMQQQHHHHPREPKVLHTLSVGHGGHIAHHDHPVGYGMMPATHTLRMLQHQPEPQPQLQHPPSPPHPKEECISPPLMEENVPVKPPPPKKRQQGRQPKVPRPKKPKKPAAPREDGAPPSAPAPRRRGPRKNIGMVINGIDLDLSRIPTRICSCTGAPQQCYRWGAGGWQSACCTTTVSTYPLLMSMKRRGARIAGRKMSHGAFKKVLEKLASEVYNLNNPIDLKTFWAKHGTNKE
OMERI10G00690.3
BBR
1
238
MWMHMQQQHHHHPREPKVLHTLSVGHGGHIAHHDHPVGYGMMPATHTLRMLQHQPEPQPQLQHPPSPPHPKEECISPPLMEENVPVKPPPPKKRQQGRQPKVPRPKKPKKPAAPREDGAPPSAPAPRRRGPRKNIGMVINGIDLDLSRIPTRICSCTGAPQQCYRWGAGGWQSACCTTTVSTYPLLMSMKRRGARIAGRKMSHGAFKKVLEKLASEVYNLNNPIDLKTFWAKHGTNKE
Links
Other
BBR
family TFs
Other
Oryza meridionalis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM10G00640
Oryza glumaepatula
OGLUM10G00640
N
0.908
OS10G0115500
Oryza sativa
OS10G0115500
N
0.894
ORUFI10G00650
Oryza rufipogon
ORUFI10G00650
N
0.890
ORUFI10G00640
Oryza rufipogon
ORUFI10G00640
N
0.835
OS10G0114500
Oryza sativa
OS10G0114500
N
0.835
OS10G0115200
Oryza sativa
OS10G0115200
N
0.835
BGIOSGA032378
Oryza indica
BGIOSGA032378
N
0.830
BGIOSGA032380
Oryza indica
BGIOSGA032380
N
0.830
OB10G10530
Oryza brachyantha
OB10G10530
N
0.830
OBART10G00640
Oryza barthii
OBART10G00640
N
0.830
OGLUM10G00620
Oryza glumaepatula
OGLUM10G00620
N
0.830
ONIVA10G01080
Oryza nivara
ONIVA10G01080
N
0.830
OGLUM10G00630
Oryza glumaepatula
OGLUM10G00630
N
0.826
ONIVA10G01090
Oryza nivara
ONIVA10G01090
N
0.826
LPERR10G00500
Leersia perrieri
LPERR10G00500
N
0.821
OB10G10650
Oryza brachyantha
OB10G10650
N
0.821
LPERR10G00510
Leersia perrieri
LPERR10G00510
N
0.817
OPUNC10G00600
Oryza punctata
OPUNC10G00600
N
0.812
OPUNC03G13410
Oryza punctata
OPUNC03G13410
N
0.807
OLONG_022525
Oryza longistaminata
OLONG_022525
N
0.771
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.743
Si036337m.g
Setaria italica
Si036337m.g
N
0.706
BRADI3G21380
Brachypodium distachyon
BRADI3G21380
N
0.702
BRADI3G21390
Brachypodium distachyon
BRADI3G21390
N
0.702