CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00024p00090860
(
Amborella trichopoda
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
AMTR_s00024p00090860
T024512_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN11048
BBR
70
360
MDSDAGLGFRNWGYIDQPLKQTLGLQLMSSVADRDILAKKSVIQTSNYPTRNPSIPECGVPISSSMEFPRDNWMNQRDLPHTAKHFEMFSGNPNFESKDYSSVLPNPQTNNNHVLPIMPPEMPQPNQVMPLENPPPVKTETQSKKKQGNRTLKVQKPKKPKVKAPKEDQNGARTSTNKSGKKNWNAVIKGIPVDIAGIPIPVCSCTGVAQQCYRWGCGGWQSACCTTQMSMYPLPMSQKRRGARIAGRKMSGGAFIKVLEKVAADGHDLSKQIDLKTHWAKHGTNKFVTIK
Links
Other
BBR
family TFs
Other
Amborella trichopoda
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.758
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.714