CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo5g019930
(
Brassica oleracea
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Bo5g019930
T024534_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g019930.1
BBR
1
269
MDDDGFRNWGYYEPAAATFKGNLGLQLMPSIDRNTKPFLTGRDPNLMIGQNGPYHHQPEPPINMSYNWINQHKDKFFNMLPVTTSNNYGNILPETSSAQSMRHHQTIEEYPVKHEQVEEIVQTNKKRKPNTKPGASAKAKKPRKPKEESDKSIKVKQAKKSVDFVINGVNMDISDLPVPVCTCTGAPQQCYRWGCGGWQSACCTTNISMHPLPMSTKRRGARISGRKMSQGAFKKVLEKLASDGFNFGNPIDLKSHWARHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Brassica oleracea
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Bra026196
Brassica rapa
Bra026196
N
0.844
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.808
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.786
Bo8g066170
Brassica oleracea
Bo8g066170
N
0.761
BPC2
Arabidopsis lyrata
fgenesh2_kg.1__1602__AT1G14685.1
I
0.752
Bra026813
Brassica rapa
Bra026813
N
0.748
BPC2
Arabidopsis thaliana
AT1G14685
N
0.745
Carubv10009978m.g
Capsella rubella
Carubv10009978m.g
N
0.744
Bra016686
Brassica rapa
Bra016686
N
0.737
Thhalv10008428m.g
Eutrema salsugineum
Thhalv10008428m.g
N
0.737
Bo8g106640
Brassica oleracea
Bo8g106640
N
0.723
Bostr.0124s0194
Boechera stricta
Bostr.0124s0194
N
0.722
Cagra.3501s0027
Capsella grandiflora
Cagra.3501s0027
N
0.720