Thhalv10008428m.g (Eutrema salsugineum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Thhalv10008428m.g T024903_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10008428m BBR 1 278
Thhalv10008432m BBR 1 278

Links

Other BBR family TFs
Other Eutrema salsugineum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
Bostr.0124s0194 Boechera stricta Bostr.0124s0194 N 0.867
Carubv10009978m.g Capsella rubella Carubv10009978m.g N 0.867
Cagra.3501s0027 Capsella grandiflora Cagra.3501s0027 N 0.859
Bo8g066170 Brassica oleracea Bo8g066170 N 0.826
BPC2 Arabidopsis thaliana AT1G14685 N 0.815
Bra016686 Brassica rapa Bra016686 N 0.815
BPC2 Arabidopsis lyrata fgenesh2_kg.1__1602__AT1G14685.1 I 0.811
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.798
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.786
Bra026196 Brassica rapa Bra026196 N 0.774
Bo8g106640 Brassica oleracea Bo8g106640 N 0.756
Bra026813 Brassica rapa Bra026813 N 0.752
Bo5g019930 Brassica oleracea Bo5g019930 N 0.737