CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Eucgr.H00573
(
Eucalyptus grandis
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Eucgr.H00573
T024847_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.H00573.1
BBR
1
285
MDGDNSLNMRNWGYYEPTATMRGLGLNLMSSVPEKPLFDSRSAAVMAASNGSAYHHRDLGASQAVYPMDYMRDAWMSPREKFFNPMSGNHNYSMIPETSTAHHMQMVQPPDLSKDERATQVEQVGIGNEIIENGPSKKRPGPKGPKSPKPKKAKRGPRAPKAETAPSVPRARTIKKTTELMINGINMDISCIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGLSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFTNPIDLRTHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Eucalyptus grandis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.857
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.848
VIT_17s0000g01860
Vitis vinifera
VIT_17s0000g01860
N
0.706
GLYMA07G12160
Glycine max
GLYMA07G12160
N
0.705
GLYMA09G30050
Glycine max
GLYMA09G30050
N
0.705