CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Aquca_002_01194
(
Aquilegia coerulea
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Aquca_002_01194
T024817_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_002_01194.1
BBR
1
288
MDDDSGLGIRNWGYYEPSLKGNLGLQLMSSVPAERDTKPFFSGREFSGRDPSAIMVSANGNYHHHRDCGIPESSIPMDFMRDGWLHQREKFLHVLPGNPNYSLICETSGSQPLHMLQSPDSSKDERMIRMEEPEIKKDGPLKKRPGGRTQKSPKTKKSKKAVPKDETNASVQRAKPGKRNTALVINGIDFDISGIPIPVCSCTGIPQQCYRWGCGGWQSACCTTSISVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNLSNPIDLRTHWAKHGTNKFVTIR
Aquca_002_01194.2
BBR
1
288
MDDDSGLGIRNWGYYEPSLKGNLGLQLMSSVPAERDTKPFFSGREFSGRDPSAIMVSANGNYHHHRDCGIPESSIPMDFMRDGWLHQREKFLHVLPGNPNYSLICETSGSQPLHMLQSPDSSKDERMIRMEEPEIKKDGPLKKRPGGRTQKSPKTKKSKKAVPKDETNASVQRAKPGKRNTALVINGIDFDISGIPIPVCSCTGIPQQCYRWGCGGWQSACCTTSISVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNLSNPIDLRTHWAKHGTNKFVTIR
Aquca_002_01194.3
BBR
1
288
MDDDSGLGIRNWGYYEPSLKGNLGLQLMSSVPAERDTKPFFSGREFSGRDPSAIMVSANGNYHHHRDCGIPESSIPMDFMRDGWLHQREKFLHVLPGNPNYSLICETSGSQPLHMLQSPDSSKDERMIRMEEPEIKKDGPLKKRPGGRTQKSPKTKKSKKAVPKDETNASVQRAKPGKRNTALVINGIDFDISGIPIPVCSCTGIPQQCYRWGCGGWQSACCTTSISVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNLSNPIDLRTHWAKHGTNKFVTIR
Aquca_002_01194.4
BBR
1
288
MDDDSGLGIRNWGYYEPSLKGNLGLQLMSSVPAERDTKPFFSGREFSGRDPSAIMVSANGNYHHHRDCGIPESSIPMDFMRDGWLHQREKFLHVLPGNPNYSLICETSGSQPLHMLQSPDSSKDERMIRMEEPEIKKDGPLKKRPGGRTQKSPKTKKSKKAVPKDETNASVQRAKPGKRNTALVINGIDFDISGIPIPVCSCTGIPQQCYRWGCGGWQSACCTTSISVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNLSNPIDLRTHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Aquilegia coerulea
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.899
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.881
OS03G0237401
Oryza sativa
OS03G0237401
N
0.706