CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla005912
(
Citrullus lanatus
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Cla005912
T024778_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla005912
BBR
1
278
MDGDALNMRNWGYYEPSLKAHLGLQLMSTIGEQDVKHFLPGRDASAIVNMNAAFHSRESVVSDASVPTSWGRDGWINHHRDKLFNMLTPTTSYSLLAETSGPQPLQMLQPHNTSRDEMVLKIEEPPVKKGTKQPKKRQNGGAPKTPKPKKPRKPKNNDPSVQRVKAPKKKMELVINGFDMDISSIPIPVCSCTGTPHQCYRWGYGGWQSACCTTSLSLHPLPMSEKRRGARIAGRKMSQGAFKKVLEKLAAQGYNFSNPIDLRSHWARHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Citrullus lanatus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Cucsa.026590
Cucumis sativus
Cucsa.026590
N
0.941
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.808
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.786
cassava39873.m1
Manihot esculenta
cassava39873.m1
N
0.711