CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo2g057480
(
Brassica oleracea
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Bo2g057480
T024528_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo2g057480.1
BBR
39
315
MDEDGLSNRDWGYYDQSQFRPSLGFQLIPSIVDRNEKQFLCPQNPNFITTNNSYCGGGSSSSNVMSFPRDYTSSDAPFMSYSWLNQHRDSKFFNNLPNPSNHHTLLDPRAQPMQLLQIPKPEAGEVYESLKRRQCGGGQRADPKAKKERKLKDNIVPRMQRERSPLRKSIEMVINGVTIDIGCLPVPVCSCTGLSQQCYRWGCGGWQSACCTTNVSMFPLPMNTKKRGARIAGRKMSQGAFKKVLEKLSADGFDFSNPIDLKSHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Brassica oleracea
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.778
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.762
Bra033959
Brassica rapa
Bra033959
N
0.723