Carubv10023579m.g (Capsella rubella)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Carubv10023579m.g T024837_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10023579m BBR 43 336
Carubv10023759m BBR 1 294

Links

Other BBR family TFs
Other Capsella rubella TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BPC4 Arabidopsis thaliana AT2G21240 N 0.901
BPC5 Arabidopsis thaliana AT4G38910 D 0.715
Bo4g145820 Brassica oleracea Bo4g145820 N 0.741
Bo7g119540 Brassica oleracea Bo7g119540 I 0.714
Bostr.25542s0071 Boechera stricta Bostr.25542s0071 I 0.777
Bostr.5022s0111 Boechera stricta Bostr.5022s0111 N 0.978
Bra030308 Brassica rapa Bra030308 N 0.732
Cagra.2961s0028 Capsella grandiflora Cagra.2961s0028 N 1.000
BPC4 Arabidopsis lyrata fgenesh2_kg.4__42__AT2G21240.1 N 0.909
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I 1.000
scaffold_200704.1 Arabidopsis lyrata scaffold_200704.1 I 0.800
Thhalv10000273m.g Eutrema salsugineum Thhalv10000273m.g N 0.759
Thhalv10025867m.g Eutrema salsugineum Thhalv10025867m.g I 0.748