CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ba02367
(
Panicum virgatum
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Pavir.Ba02367
T024882_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba02367.1.p
BBR
1
324
MDDDGGLGIRNWGFYDMKGSLGLQLMSSVPADRDTKSLLPAGAFLQHHGHHNAPHQLHSHHARDSGGGGTSGGMPTEPQSIHMDFSRNEAWVHPSHHQHPREQKVLHARPVGPAGHVGHPGHGGHPGHDAPHALQMMQVQPQLQSQLEEPPPCKEEDVPPPLVDQSLVKTEPPVKKRQRGGQPKSPKPKKPKKAAVPREDRAVNGHAPRGRGPKKTVGMVINGIELDLSNIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGAFKKVLEKLVGEGYNLANPIDLKTFWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Panicum virgatum
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_78141
Agaricus bisporus
AGABI2DRAFT_78141
N
0.000
DICSQDRAFT_137077
Dichomitus squalens
DICSQDRAFT_137077
N
0.000
GALMADRAFT_158573
Galerina marginata
GALMADRAFT_158573
N
0.000
gw1.9.705.1
Heterobasidion annosum
gw1.9.705.1
N
0.000
HETIRDRAFT_239108
Heterobasidion irregulare
HETIRDRAFT_239108
N
0.000
Moror_3852
Moniliophthora roreri
Moror_3852
N
0.000
PISMIDRAFT_116994
Pisolithus microcarpus
PISMIDRAFT_116994
N
0.000
PLEOSDRAFT_1107661
Pleurotus ostreatus
PLEOSDRAFT_1107661
N
0.000
PLICRDRAFT_45561
Plicaturopsis crispa
PLICRDRAFT_45561
N
0.000