CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA04G24770
(
Oryza nivara
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
ONIVA04G24770
T027111_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA04G24770.1
BED ZF
143
191
SGVWQHFEIVEEKNGKPAKAKCIDCHTVVKCGSDNGTSVLHNHRNSGKC
Links
Other
BED ZF
family TFs
Other
Oryza nivara
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA017162
Oryza indica
BGIOSGA017162
N
0.714
LPERR04G21350
Leersia perrieri
LPERR04G21350
N
0.744
LPERR04G21390
Leersia perrieri
LPERR04G21390
N
0.814
OBART04G26190
Oryza barthii
OBART04G26190
N
0.857
OBART04G26230
Oryza barthii
OBART04G26230
N
0.953
OBART04G26300
Oryza barthii
OBART04G26300
N
0.714
OLONG_018092
Oryza longistaminata
OLONG_018092
N
0.714
OLONG_022572
Oryza longistaminata
OLONG_022572
N
0.953
ORUFI04G27440
Oryza rufipogon
ORUFI04G27440
N
0.714