CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART04G26230
(
Oryza barthii
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
OBART04G26230
T027063_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART04G26230.1
BED ZF
145
193
SGVWQYFEIVEEKNGKPAKAKCVDCHTVVKCGSDNGTSVLHNHRNSGKC
Links
Other
BED ZF
family TFs
Other
Oryza barthii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA04G24770
Oryza nivara
ONIVA04G24770
N
0.953
OLONG_022572
Oryza longistaminata
OLONG_022572
N
0.907
OBART04G26190
Oryza barthii
OBART04G26190
N
0.857
LPERR04G21390
Leersia perrieri
LPERR04G21390
N
0.767
OLONG_022576
Oryza longistaminata
OLONG_022576
N
0.727