gene13122-v1.0-hybrid (Fragaria vesca)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 gene13122-v1.0-hybrid T028287_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13122.1-v1.0-hybrid BED ZF 6 49

Links

Other BED ZF family TFs
Other Fragaria vesca TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006547 Ricinus communis 30169.m006547 N 0.950
AT1G79740 Arabidopsis thaliana AT1G79740 N 0.850
Carubv10019846m.g Capsella rubella Carubv10019846m.g N 0.850
Cla004997 Citrullus lanatus Cla004997 N 0.950
Cucsa.201910 Cucumis sativus Cucsa.201910 N 0.950
evm.TU.supercontig_3.39 Carica papaya evm.TU.supercontig_3.39 N 0.800
GLYMA06G12991 Glycine max GLYMA06G12991 N 0.925
MDP0000411586 Malus domestica MDP0000411586 N 0.900
MDP0000520527 Malus domestica MDP0000520527 N 0.900
PGSC0003DMG400009096 Solanum tuberosum PGSC0003DMG400009096 N 0.795
PK04121.1 Cannabis sativa PK04121.1 N 0.925
PRUPE_ppa002763mg Prunus persica PRUPE_ppa002763mg N 0.950
Solyc03g007510.2 Solanum lycopersicum Solyc03g007510.2 N 0.769
TCM_015328 Theobroma cacao TCM_015328 N 0.925
VIT_16s0050g02440 Vitis vinifera VIT_16s0050g02440 N 0.925