PGSC0003DMG400009096 (Solanum tuberosum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 PGSC0003DMG400009096 T027240_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400023490 BED ZF 6 51

Links

Other BED ZF family TFs
Other Solanum tuberosum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc03g007510.2 Solanum lycopersicum Solyc03g007510.2 N 0.974
evm.TU.supercontig_3.39 Carica papaya evm.TU.supercontig_3.39 N 0.974
TCM_015328 Theobroma cacao TCM_015328 N 0.872
VIT_16s0050g02440 Vitis vinifera VIT_16s0050g02440 N 0.872
GLYMA06G12991 Glycine max GLYMA06G12991 N 0.846
PRUPE_ppa002763mg Prunus persica PRUPE_ppa002763mg N 0.846
30169.m006547 Ricinus communis 30169.m006547 N 0.846
PK04121.1 Cannabis sativa PK04121.1 N 0.825
OB01G17890 Oryza brachyantha OB01G17890 N 0.821
MDP0000411586 Malus domestica MDP0000411586 N 0.821
MDP0000520527 Malus domestica MDP0000520527 N 0.821
Cla004997 Citrullus lanatus Cla004997 N 0.800
Cucsa.201910 Cucumis sativus Cucsa.201910 N 0.800
AT1G79740 Arabidopsis thaliana AT1G79740 N 0.795
BRADI2G07297 Brachypodium distachyon BRADI2G07297 N 0.795
Carubv10019846m.g Capsella rubella Carubv10019846m.g N 0.795
gene13122-v1.0-hybrid Fragaria vesca gene13122-v1.0-hybrid N 0.795
Pavir.Ea00125 Panicum virgatum Pavir.Ea00125 N 0.795
Sb03g001335 Sorghum bicolor Sb03g001335 N 0.775
Pavir.Eb00173 Panicum virgatum Pavir.Eb00173 N 0.775
BGIOSGA002103 Oryza indica BGIOSGA002103 N 0.769
ORGLA01G0068100 Oryza glaberrima ORGLA01G0068100 N 0.769
OS01G0222700 Oryza sativa OS01G0222700 N 0.769
GSMUA_Achr8G19830_001 Musa acuminata GSMUA_Achr8G19830_001 N 0.744
MLOC_67613 Hordeum vulgare MLOC_67613 N 0.718
Traes_3DS_5523A155D Triticum aestivum Traes_3DS_5523A155D N 0.718
TRIUR3_07707 Triticum urartu TRIUR3_07707 N 0.718