CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G07297
(
Brachypodium distachyon
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
BRADI2G07297
T025681_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G07297.1
BED ZF
25
70
DACWEYGDKLDGNRVRCKFCLKIINGGISRFKFHLSQIPSKGVNPC
BRADI2G07297.2
BED ZF
5
50
DACWEYGDKLDGNRVRCKFCLKIINGGISRFKFHLSQIPSKGVNPC
Links
Other
BED ZF
family TFs
Other
Brachypodium distachyon
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_67613
Hordeum vulgare
MLOC_67613
N
0.923
Traes_3DS_5523A155D
Triticum aestivum
Traes_3DS_5523A155D
N
0.923
TRIUR3_07707
Triticum urartu
TRIUR3_07707
N
0.923
Pavir.Ea00125
Panicum virgatum
Pavir.Ea00125
N
0.821
Sb03g001335
Sorghum bicolor
Sb03g001335
N
0.800
Pavir.Eb00173
Panicum virgatum
Pavir.Eb00173
N
0.800
OB01G17890
Oryza brachyantha
OB01G17890
N
0.795
PGSC0003DMG400009096
Solanum tuberosum
PGSC0003DMG400009096
N
0.795
Solyc03g007510.2
Solanum lycopersicum
Solyc03g007510.2
N
0.769
evm.TU.supercontig_3.39
Carica papaya
evm.TU.supercontig_3.39
N
0.769
BGIOSGA002103
Oryza indica
BGIOSGA002103
N
0.744
ORGLA01G0068100
Oryza glaberrima
ORGLA01G0068100
N
0.744
OS01G0222700
Oryza sativa
OS01G0222700
N
0.744
GSMUA_Achr8G19830_001
Musa acuminata
GSMUA_Achr8G19830_001
N
0.718