Pavir.Ea01012 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Ea01012 T028457_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea01012.1.p BED ZF 223 257

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_142750 Albugo laibachii ALNC14_142750 N
estExt_fgenesh1_kg.C_30538 Phytophthora capsici estExt_fgenesh1_kg.C_30538 N
F443_05152 Phytophthora parasitica F443_05152 N
fgenesh_scip_prom.28083.4657 Phytophthora lateralis fgenesh_scip_prom.28083.4657 N
fgenesh_scip_prom.46568.9178 Phytophthora kernoviae fgenesh_scip_prom.46568.9178 N
HpaG812689 Hyaloperonospora arabidopsidis HpaG812689 N
maker-pag1_scaffold_149-fgenesh-gene-0.12 Pythium aphanidermatum maker-pag1_scaffold_149-fgenesh-gene-0.12 N
maker-par_contig_322-snap-gene-0.15 Pythium arrhenomanes maker-par_contig_322-snap-gene-0.15 N
maker-pir_contig_546-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_546-fgenesh-gene-0.1 N
maker-piw_contig_12-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_12-fgenesh-gene-0.1 N
maker-pve_contig_133-fgenesh-gene-0.7 Pythium vexans maker-pve_contig_133-fgenesh-gene-0.7 N
Phyra76743 Phytophthora ramorum Phyra76743 N
Physo130359 Phytophthora sojae Physo130359 N
PITG_13845 Phytophthora infestans PITG_13845 N
PYU1_G006167 Pythium ultimum PYU1_G006167 N
SPRG_15862 Saprolegnia parasitica SPRG_15862 N