CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ea01012
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Ea01012
T028457_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ea01012.1.p
BED ZF
223
257
DWQHKRPEMKVCPICSKNVGLSTSSLKLHLQKAHK
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS01G0311500
Oryza sativa
OS01G0311500
N
1.000
Traes_1BL_62B61DD89
Triticum aestivum
Traes_1BL_62B61DD89
N
0.906
PGSC0003DMG401014249
Solanum tuberosum
PGSC0003DMG401014249
N
0.889