Pavir.J10621 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J10621 T028564_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J10621.1.p BED ZF 31 78

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_22589 Ancylostoma caninum ANCCAN_22589 I
CBG19870 Caenorhabditis briggsae CBG19870 I
CBN08077 Caenorhabditis brenneri CBN08077 I
CBN16259 Caenorhabditis brenneri CBN16259 I
CJA19491 Caenorhabditis japonica CJA19491 I
CRE28659 Caenorhabditis remanei CRE28659 I
CRE30546 Caenorhabditis remanei CRE30546 I
L596_g14937 Steinernema carpocapsae L596_g14937 I
L889_g304 Steinernema feltiae L889_g304 I
L892_g3686 Steinernema scapterisci L892_g3686 I
L893_g13425 Steinernema glaseri L893_g13425 I
L898_g30036 Steinernema monticolum L898_g30036 I
PPA17263 Pristionchus pacificus PPA17263 I
scaffold19-EXSNAP2012.26 Pristionchus exspectatus scaffold19-EXSNAP2012.26 I
scaffold303-EXSNAP2012.4 Pristionchus exspectatus scaffold303-EXSNAP2012.4 I
scaffold731-EXSNAP2012.1 Pristionchus exspectatus scaffold731-EXSNAP2012.1 I
nhr-46 Caenorhabditis elegans WBGene00003636 D