L893_g13425 (Steinernema glaseri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L893_g13425 T309323_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-46
M00692_2.00 		Caenorhabditis elegans
NNNDWNHRN
NYDNWHNNN		 PBM
Narasimhan et al.(2015)
pTH9924 		0.922 0.714
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g13425.t1 Nuclear receptor 242 312
L893_g13425.t2 Nuclear receptor 242 312
L893_g13425.t3 Nuclear receptor 242 312

Links

Other Nuclear receptor family TFs
Other Steinernema glaseri TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g14937 Steinernema carpocapsae L596_g14937 I 0.993
L889_g304 Steinernema feltiae L889_g304 I 0.993
L892_g3686 Steinernema scapterisci L892_g3686 I 0.993
L898_g30036 Steinernema monticolum L898_g30036 I 0.993
ANCCAN_22589 Ancylostoma caninum ANCCAN_22589 I 0.980
nhr-46 Caenorhabditis elegans WBGene00003636 D 0.922
CBG19870 Caenorhabditis briggsae CBG19870 I 0.921
CBN08077 Caenorhabditis brenneri CBN08077 I 0.921
CBN16259 Caenorhabditis brenneri CBN16259 I 0.921
CJA19491 Caenorhabditis japonica CJA19491 I 0.921
CRE28659 Caenorhabditis remanei CRE28659 I 0.921
CRE30546 Caenorhabditis remanei CRE30546 I 0.921
PPA17263 Pristionchus pacificus PPA17263 I 0.844
scaffold731-EXSNAP2012.1 Pristionchus exspectatus scaffold731-EXSNAP2012.1 I 0.844
scaffold19-EXSNAP2012.26 Pristionchus exspectatus scaffold19-EXSNAP2012.26 I 0.812
scaffold303-EXSNAP2012.4 Pristionchus exspectatus scaffold303-EXSNAP2012.4 I 0.794