CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000025039
(
Astyanax mexicanus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSAMXG00000025039
T032952_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TWIST1
M08052_2.00
Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN
ChIP-seq
Mathelier et al.(2014)
MA1123.1
0.883
0.904
TWIST1
M08722_2.00
Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW
Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A
0.883
0.904
Twist1
M08766_2.00
Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW
Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B
0.883
0.904
TWIST1
M09831_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6_01
0.883
0.904
TWIST1
M09832_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6
0.883
0.904
Twist2
M01718_2.00
Mus musculus
NACATATGKN
NMCATATGTN
PBM
Weirauch et al.(2014)
pTH5033
0.883
0.885
twi
M03605_2.00
Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK
SELEX
Nitta et al.(2015)
twi_1
0.879
0.865
twi
M03606_2.00
Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK
SELEX
Nitta et al.(2015)
twi_2
0.879
0.865
twi
M05955_2.00
Drosophila melanogaster
VCCAGATGTB
VACATCTGGB
B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900
0.879
0.865
twi
M05956_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900
0.879
0.865
twi
M07538_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
DNaseI footprinting
Mathelier et al.(2014)
MA0249.1
0.879
0.865
twi
M09657_2.00
Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT
Misc
Kulakovskiy et al.(2009)
twi
0.879
0.865
twi
M09892_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TWI_Q6
0.879
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000025745
bHLH
118
169
QRVIANVRERQRTQSLNDAFASLRKIIPTLPSDKLSKIQILKLASRYIDFLY
Links
Other
bHLH
family TFs
Other
Astyanax mexicanus
TFs
229 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG009080.1
Alligator sinensis
Alligator_sinensis_CCG009080.1
N
Cmyd_10016724
Chelonia mydas
Cmyd_10016724
N
ENSACAG00000024733
Anolis carolinensis
ENSACAG00000024733
N
ENSAMEG00000018149
Ailuropoda melanoleuca
ENSAMEG00000018149
N
ENSAPLG00000007392
Anas platyrhynchos
ENSAPLG00000007392
N
ZFPM1
Bos taurus
ENSBTAG00000015766
N
ENSCAFG00000032382
Canis familiaris
ENSCAFG00000032382
N
ENSCJAG00000012840
Callithrix jacchus
ENSCJAG00000012840
N
ENSCSAG00000003107
Chlorocebus sabaeus
ENSCSAG00000003107
N
ENSDNOG00000040837
Dasypus novemcinctus
ENSDNOG00000040837
N
ENSDORG00000008940
Dipodomys ordii
ENSDORG00000008940
N
ENSFALG00000006492
Ficedula albicollis
ENSFALG00000006492
N
ZFPM1
Homo sapiens
ENSG00000179588
N
ZFPM1
Gallus gallus
ENSGALG00000006099
N
ENSMGAG00000007619
Meleagris gallopavo
ENSMGAG00000007619
N
ENSMLUG00000029422
Myotis lucifugus
ENSMLUG00000029422
N
ENSMPUG00000008220
Mustela putorius furo
ENSMPUG00000008220
N
Zfpm1
Mus musculus
ENSMUSG00000049577
N
ZFPM1
Otolemur garnettii
ENSOGAG00000028472
N
ENSP00000326630-D1
Bos grunniens
ENSP00000326630-D1
N
ENSPANG00000005497
Papio anubis
ENSPANG00000005497
N
ENSPPYG00000007637
Pongo abelii
ENSPPYG00000007637
N
ZFPM1
Pteropus vampyrus
ENSPVAG00000005587
N
Zfpm1
Rattus norvegicus
ENSRNOG00000043077
N
ENSSTOG00000027139
Ictidomys tridecemlineatus
ENSSTOG00000027139
N
ENSTGUG00000007708
Taeniopygia guttata
ENSTGUG00000007708
N
ZFPM1
Tursiops truncatus
ENSTTRG00000014484
N
Myotis_brandtii_ZFPM1_10035266
Myotis brandtii
Myotis_brandtii_ZFPM1_10035266
N
Ogr16761
Ophisaurus gracilis
Ogr16761
N
Pvit_16331
Pogona vitticeps
Pvit_16331
N