her6 (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000006514 T033625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hes1
M01726_2.00 		Mus musculus
NVCACGYKNN
NNMRCGTGBN		 PBM
Weirauch et al.(2014)
pTH5059 		0.882 0.964
HES1
M04090_2.00 		Homo sapiens
VVCACGYGHM
KDCRCGTGBB		 SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX 		0.882 0.964
HES1
M09822_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q2 		0.882 0.964
HES1
M09823_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q3 		0.882 0.964
HES1
M09824_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q4 		0.882 0.964
HES1
M09825_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q6 		0.882 0.964
HES1
M04091_2.00 		Homo sapiens
VNYACNYNHN
NDNRNGTRNB		 SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX 		0.882 0.964
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000018393 bHLH 35 92

Links

Other bHLH family TFs
Other Danio rerio TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAY96799 Xenopus tropicalis AAY96799 I 0.882
AAZ04408 Xenopus tropicalis AAZ04408 I 0.882
Alligator_sinensis_CCG015374.1 Alligator sinensis Alligator_sinensis_CCG015374.1 I 0.882
HES1 Anolis carolinensis ENSACAG00000001611 I 0.882
ENSAMEG00000015855 Ailuropoda melanoleuca ENSAMEG00000015855 I 0.882
ENSAMXG00000012278 Astyanax mexicanus ENSAMXG00000012278 I 0.914
ENSAMXG00000012796 Astyanax mexicanus ENSAMXG00000012796 I 0.914
ENSAPLG00000008077 Anas platyrhynchos ENSAPLG00000008077 I 0.882
HES1 Bos taurus ENSBTAG00000000569 I 0.882
ENSBTAP00000000742-D1 Bos grunniens ENSBTAP00000000742-D1 I 0.882
HES1 Choloepus hoffmanni ENSCHOG00000005633 I 0.882
HES1 Callithrix jacchus ENSCJAG00000014044 I 0.882
ENSCPOG00000021042 Cavia porcellus ENSCPOG00000021042 I 0.882
ENSCSAG00000000668 Chlorocebus sabaeus ENSCSAG00000000668 I 0.858
ENSCSAG00000008869 Chlorocebus sabaeus ENSCSAG00000008869 I 0.882
her9 Danio rerio ENSDARG00000056438 I 0.882
HES4 Dasypus novemcinctus ENSDNOG00000024495 I 0.838
HES1 Dasypus novemcinctus ENSDNOG00000039639 I 0.882
ENSDORG00000014783 Dipodomys ordii ENSDORG00000014783 I 0.882
HES1 Equus caballus ENSECAG00000026945 I 0.882
ENSFALG00000007228 Ficedula albicollis ENSFALG00000007228 I 0.882
HES1 Homo sapiens ENSG00000114315 D 0.882
HES4 Homo sapiens ENSG00000188290 I 0.858
her9 Gasterosteus aculeatus ENSGACG00000007334 I 0.882
her6 Gasterosteus aculeatus ENSGACG00000009264 I 0.882
ENSGACG00000015969 Gasterosteus aculeatus ENSGACG00000015969 I 0.882
hairy1 Gallus gallus ENSGALG00000002055 I 0.882
HES1 Gorilla gorilla ENSGGOG00000008521 I 0.882
HES4 Gorilla gorilla ENSGGOG00000013399 I 0.858
ENSGMOG00000000092 Gadus morhua ENSGMOG00000000092 I 0.882
ENSGMOG00000015708 Gadus morhua ENSGMOG00000015708 I 0.882
ENSGMOG00000018048 Gadus morhua ENSGMOG00000018048 I 0.882
ENSLACG00000009729 Latimeria chalumnae ENSLACG00000009729 I 0.882
ENSLACG00000017918 Latimeria chalumnae ENSLACG00000017918 I 0.882
HES1 Loxodonta africana ENSLAFG00000008932 I 0.882
ENSLOCG00000004988 Lepisosteus oculatus ENSLOCG00000004988 I 0.882
ENSLOCG00000007298 Lepisosteus oculatus ENSLOCG00000007298 I 0.882
ENSMEUG00000013941 Macropus eugenii ENSMEUG00000013941 I 0.882
HES1 Meleagris gallopavo ENSMGAG00000007566 I 0.882
ENSMICG00000012430 Microcebus murinus ENSMICG00000012430 I 0.882
HES4 Microcebus murinus ENSMICG00000015660 I 0.858
HES1 Myotis lucifugus ENSMLUG00000008549 I 0.858
HES4 Macaca mulatta ENSMMUG00000001817 I 0.858
HES4 Monodelphis domestica ENSMODG00000018647 I 0.882
ENSMODG00000019833 Monodelphis domestica ENSMODG00000019833 I 0.882
ENSMPUG00000003643 Mustela putorius furo ENSMPUG00000003643 I 0.882
Hes1 Mus musculus ENSMUSG00000022528 D 0.882
ENSNLEG00000006836 Nomascus leucogenys ENSNLEG00000006836 I 0.882
HES1 Ornithorhynchus anatinus ENSOANG00000015683 I 0.882
ENSOARG00000020422 Ovis aries ENSOARG00000020422 I 0.882
HES1 Oryctolagus cuniculus ENSOCUG00000009363 I 0.882
HES1 Otolemur garnettii ENSOGAG00000032425 I 0.882
ENSONIG00000002398 Oreochromis niloticus ENSONIG00000002398 I 0.882
ENSONIG00000002619 Oreochromis niloticus ENSONIG00000002619 I 0.882
ENSONIG00000010641 Oreochromis niloticus ENSONIG00000010641 I 0.882
ENSORLG00000004584 Oryzias latipes ENSORLG00000004584 I 0.857
hes4 Oryzias latipes ENSORLG00000005453 I 0.882
hes1 Oryzias latipes ENSORLG00000007556 I 0.882
ENSP00000232424 Macaca fascicularis ENSP00000232424 I 0.882
ENSPANG00000018250 Papio anubis ENSPANG00000018250 I 0.882
ENSPANG00000024455 Papio anubis ENSPANG00000024455 I 0.858
ENSPFOG00000016659 Poecilia formosa ENSPFOG00000016659 I 0.882
ENSPFOG00000019084 Poecilia formosa ENSPFOG00000019084 I 0.882
ENSPFOG00000022586 Poecilia formosa ENSPFOG00000022586 I 0.882
ENSPPYG00000014419 Pongo abelii ENSPPYG00000014419 I 0.882
ENSPSIG00000013040 Pelodiscus sinensis ENSPSIG00000013040 I 0.882
HES1 Pan troglodytes ENSPTRG00000015753 I 0.882
ENSPTRG00000023647 Pan troglodytes ENSPTRG00000023647 I 0.858
ENSPTRG00000039445 Pan troglodytes ENSPTRG00000039445 I 0.858
HES1 Pteropus vampyrus ENSPVAG00000015487 I 0.882
Hes1 Rattus norvegicus ENSRNOG00000001720 I 0.882
ENSSSCG00000024430 Sus scrofa ENSSSCG00000024430 I 0.858
ENSSSCG00000026362 Sus scrofa ENSSSCG00000026362 I 0.882
ENSSTOG00000026531 Ictidomys tridecemlineatus ENSSTOG00000026531 I 0.882
HES4 Taeniopygia guttata ENSTGUG00000009134 I 0.882
ENSTNIG00000007837 Tetraodon nigroviridis ENSTNIG00000007837 I 0.852
her9 Tetraodon nigroviridis ENSTNIG00000015161 I 0.882
her6 Tetraodon nigroviridis ENSTNIG00000015567 I 0.882
ENSTRUG00000001493 Takifugu rubripes ENSTRUG00000001493 I 0.852
her9 Takifugu rubripes ENSTRUG00000009985 I 0.882
her6 Takifugu rubripes ENSTRUG00000017395 I 0.882
HES1 Tursiops truncatus ENSTTRG00000001687 I 0.882
ENSXMAG00000003794 Xiphophorus maculatus ENSXMAG00000003794 I 0.882
ENSXMAG00000004442 Xiphophorus maculatus ENSXMAG00000004442 I 0.882
estExt_fgenesh2_kg.C_140002 Branchiostoma floridae estExt_fgenesh2_kg.C_140002 I 0.882
estExt_fgenesh2_kg.C_9080002 Branchiostoma floridae estExt_fgenesh2_kg.C_9080002 I 0.882
estExt_fgenesh2_pg.C_2610041 Branchiostoma floridae estExt_fgenesh2_pg.C_2610041 I 0.862
estExt_fgenesh2_pg.C_2610044 Branchiostoma floridae estExt_fgenesh2_pg.C_2610044 I 0.852
estExt_fgenesh2_pg.C_3520029 Branchiostoma floridae estExt_fgenesh2_pg.C_3520029 I 0.862
estExt_fgenesh2_pg.C_3520032 Branchiostoma floridae estExt_fgenesh2_pg.C_3520032 I 0.852
estExt_fgenesh2_pg.C_3670032 Branchiostoma floridae estExt_fgenesh2_pg.C_3670032 I 0.862
estExt_GenewiseH_1.C_2610051 Branchiostoma floridae estExt_GenewiseH_1.C_2610051 I 0.862
estExt_GenewiseH_1.C_960240 Branchiostoma floridae estExt_GenewiseH_1.C_960240 I 0.862
Myotis_brandtii_Hes1_10032756 Myotis brandtii Myotis_brandtii_Hes1_10032756 I 0.882
Ogr04559 Ophisaurus gracilis Ogr04559 I 0.882
Ogr11517 Ophisaurus gracilis Ogr11517 I 0.882
Pvit_06331 Pogona vitticeps Pvit_06331 I 0.882
Pvit_14102 Pogona vitticeps Pvit_14102 I 0.882
hes4 Xenopus tropicalis XB-GENE-487830 I 0.882
hes1 Xenopus tropicalis XB-GENE-487995 I 0.882
hes4.S Xenopus laevis XB-GENE-6256031 I 0.882
hes1.S Xenopus laevis XB-GENE-6256448 I 0.882
hes4.L Xenopus laevis XB-GENE-865740 I 0.882
hes1.L Xenopus laevis XB-GENE-865756 I 0.882