her9 (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000056438 T033706_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hes1
M01726_2.00 		Mus musculus
NVCACGYKNN
NNMRCGTGBN		 PBM
Weirauch et al.(2014)
pTH5059 		0.914 0.982
HES1
M04090_2.00 		Homo sapiens
VVCACGYGHM
KDCRCGTGBB		 SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX 		0.914 0.982
HES1
M09822_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q2 		0.914 0.982
HES1
M09823_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q3 		0.914 0.982
HES1
M09824_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q4 		0.914 0.982
HES1
M09825_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q6 		0.914 0.982
HES1
M04091_2.00 		Homo sapiens
VNYACNYNHN
NDNRNGTRNB		 SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX 		0.914 0.982
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000073394 bHLH 35 92

Links

Other bHLH family TFs
Other Danio rerio TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HES1 Anolis carolinensis ENSACAG00000001611 I 0.914
ENSAMEG00000015855 Ailuropoda melanoleuca ENSAMEG00000015855 I 0.914
ENSAPLG00000008077 Anas platyrhynchos ENSAPLG00000008077 I 0.914
HES1 Bos taurus ENSBTAG00000000569 I 0.914
HES1 Choloepus hoffmanni ENSCHOG00000005633 I 0.914
HES1 Callithrix jacchus ENSCJAG00000014044 I 0.914
ENSCPOG00000021042 Cavia porcellus ENSCPOG00000021042 I 0.914
ENSCSAG00000008869 Chlorocebus sabaeus ENSCSAG00000008869 I 0.914
HES1 Dasypus novemcinctus ENSDNOG00000039639 I 0.914
ENSDORG00000014783 Dipodomys ordii ENSDORG00000014783 I 0.914
HES1 Equus caballus ENSECAG00000026945 I 0.914
ENSFALG00000007228 Ficedula albicollis ENSFALG00000007228 I 0.914
HES1 Homo sapiens ENSG00000114315 D 0.914
her9 Gasterosteus aculeatus ENSGACG00000007334 I 0.914
her6 Gasterosteus aculeatus ENSGACG00000009264 I 0.914
ENSGACG00000015969 Gasterosteus aculeatus ENSGACG00000015969 I 0.914
hairy1 Gallus gallus ENSGALG00000002055 I 0.914
HES1 Gorilla gorilla ENSGGOG00000008521 I 0.914
ENSGMOG00000000092 Gadus morhua ENSGMOG00000000092 I 0.914
ENSGMOG00000015708 Gadus morhua ENSGMOG00000015708 I 0.914
ENSGMOG00000018048 Gadus morhua ENSGMOG00000018048 I 0.914
ENSLACG00000009729 Latimeria chalumnae ENSLACG00000009729 I 0.914
ENSLACG00000017918 Latimeria chalumnae ENSLACG00000017918 I 0.914
HES1 Loxodonta africana ENSLAFG00000008932 I 0.914
ENSLOCG00000004988 Lepisosteus oculatus ENSLOCG00000004988 I 0.914
ENSLOCG00000007298 Lepisosteus oculatus ENSLOCG00000007298 I 0.914
ENSMEUG00000013941 Macropus eugenii ENSMEUG00000013941 I 0.914
HES1 Meleagris gallopavo ENSMGAG00000007566 I 0.914
ENSMICG00000012430 Microcebus murinus ENSMICG00000012430 I 0.914
HES4 Monodelphis domestica ENSMODG00000018647 I 0.914
ENSMODG00000019833 Monodelphis domestica ENSMODG00000019833 I 0.914
ENSMPUG00000003643 Mustela putorius furo ENSMPUG00000003643 I 0.914
Hes1 Mus musculus ENSMUSG00000022528 D 0.914
ENSNLEG00000006836 Nomascus leucogenys ENSNLEG00000006836 I 0.914
HES1 Ornithorhynchus anatinus ENSOANG00000015683 I 0.914
ENSOARG00000020422 Ovis aries ENSOARG00000020422 I 0.914
HES1 Oryctolagus cuniculus ENSOCUG00000009363 I 0.914
HES1 Otolemur garnettii ENSOGAG00000032425 I 0.914
ENSONIG00000002398 Oreochromis niloticus ENSONIG00000002398 I 0.914
ENSONIG00000002619 Oreochromis niloticus ENSONIG00000002619 I 0.914
ENSONIG00000010641 Oreochromis niloticus ENSONIG00000010641 I 0.914
hes4 Oryzias latipes ENSORLG00000005453 I 0.914
hes1 Oryzias latipes ENSORLG00000007556 I 0.914
ENSPANG00000018250 Papio anubis ENSPANG00000018250 I 0.914
ENSPFOG00000016659 Poecilia formosa ENSPFOG00000016659 I 0.914
ENSPFOG00000019084 Poecilia formosa ENSPFOG00000019084 I 0.914
ENSPFOG00000022586 Poecilia formosa ENSPFOG00000022586 I 0.914
ENSPPYG00000014419 Pongo abelii ENSPPYG00000014419 I 0.914
ENSPSIG00000013040 Pelodiscus sinensis ENSPSIG00000013040 I 0.914
HES1 Pan troglodytes ENSPTRG00000015753 I 0.914
HES1 Pteropus vampyrus ENSPVAG00000015487 I 0.914
Hes1 Rattus norvegicus ENSRNOG00000001720 I 0.914
ENSSSCG00000026362 Sus scrofa ENSSSCG00000026362 I 0.914
ENSSTOG00000026531 Ictidomys tridecemlineatus ENSSTOG00000026531 I 0.914
HES4 Taeniopygia guttata ENSTGUG00000009134 I 0.914
her9 Tetraodon nigroviridis ENSTNIG00000015161 I 0.914
her6 Tetraodon nigroviridis ENSTNIG00000015567 I 0.914
her9 Takifugu rubripes ENSTRUG00000009985 I 0.914
her6 Takifugu rubripes ENSTRUG00000017395 I 0.914
HES1 Tursiops truncatus ENSTTRG00000001687 I 0.914
ENSXMAG00000003794 Xiphophorus maculatus ENSXMAG00000003794 I 0.914
ENSXMAG00000004442 Xiphophorus maculatus ENSXMAG00000004442 I 0.914
Alligator_sinensis_CCG015374.1 Alligator sinensis Alligator_sinensis_CCG015374.1 I 0.914
ENSBTAP00000000742-D1 Bos grunniens ENSBTAP00000000742-D1 I 0.914
ENSP00000232424 Macaca fascicularis ENSP00000232424 I 0.914
Myotis_brandtii_Hes1_10032756 Myotis brandtii Myotis_brandtii_Hes1_10032756 I 0.914
Ogr04559 Ophisaurus gracilis Ogr04559 I 0.914
Ogr11517 Ophisaurus gracilis Ogr11517 I 0.914
Pvit_06331 Pogona vitticeps Pvit_06331 I 0.914
Pvit_14102 Pogona vitticeps Pvit_14102 I 0.914
AAY96799 Xenopus tropicalis AAY96799 I 0.914
AAZ04408 Xenopus tropicalis AAZ04408 I 0.914
hes4 Xenopus tropicalis XB-GENE-487830 I 0.914
hes1 Xenopus tropicalis XB-GENE-487995 I 0.914
hes4.S Xenopus laevis XB-GENE-6256031 I 0.914
hes1.S Xenopus laevis XB-GENE-6256448 I 0.914
hes4.L Xenopus laevis XB-GENE-865740 I 0.914
hes1.L Xenopus laevis XB-GENE-865756 I 0.914
estExt_fgenesh2_pg.C_2610041 Branchiostoma floridae estExt_fgenesh2_pg.C_2610041 I 0.894
estExt_fgenesh2_pg.C_3520029 Branchiostoma floridae estExt_fgenesh2_pg.C_3520029 I 0.894
estExt_fgenesh2_pg.C_3670032 Branchiostoma floridae estExt_fgenesh2_pg.C_3670032 I 0.894
estExt_GenewiseH_1.C_2610051 Branchiostoma floridae estExt_GenewiseH_1.C_2610051 I 0.894
estExt_GenewiseH_1.C_960240 Branchiostoma floridae estExt_GenewiseH_1.C_960240 I 0.894
ENSCSAG00000000668 Chlorocebus sabaeus ENSCSAG00000000668 I 0.890
HES4 Homo sapiens ENSG00000188290 I 0.890
HES4 Gorilla gorilla ENSGGOG00000013399 I 0.890
HES4 Microcebus murinus ENSMICG00000015660 I 0.890
HES4 Macaca mulatta ENSMMUG00000001817 I 0.890
ENSPANG00000024455 Papio anubis ENSPANG00000024455 I 0.890
ENSPTRG00000023647 Pan troglodytes ENSPTRG00000023647 I 0.890
ENSPTRG00000039445 Pan troglodytes ENSPTRG00000039445 I 0.890
ENSSSCG00000024430 Sus scrofa ENSSSCG00000024430 I 0.890
ENSORLG00000004584 Oryzias latipes ENSORLG00000004584 I 0.889
ENSTNIG00000007837 Tetraodon nigroviridis ENSTNIG00000007837 I 0.884
ENSTRUG00000001493 Takifugu rubripes ENSTRUG00000001493 I 0.884
estExt_fgenesh2_pg.C_2610044 Branchiostoma floridae estExt_fgenesh2_pg.C_2610044 I 0.884
estExt_fgenesh2_pg.C_3520032 Branchiostoma floridae estExt_fgenesh2_pg.C_3520032 I 0.884
ENSAMXG00000012278 Astyanax mexicanus ENSAMXG00000012278 I 0.882
ENSAMXG00000012796 Astyanax mexicanus ENSAMXG00000012796 I 0.882
her6 Danio rerio ENSDARG00000006514 I 0.882
estExt_fgenesh2_kg.C_140002 Branchiostoma floridae estExt_fgenesh2_kg.C_140002 I 0.882
estExt_fgenesh2_kg.C_9080002 Branchiostoma floridae estExt_fgenesh2_kg.C_9080002 I 0.882
HES4 Dasypus novemcinctus ENSDNOG00000024495 I 0.870
HES4 Bos taurus ENSBTAG00000014705 I 0.867
ENSOARG00000007304 Ovis aries ENSOARG00000007304 I 0.867
HES4 Pteropus vampyrus ENSPVAG00000010837 I 0.862
HES2 Procavia capensis ENSPCAG00000007135 I 0.860
ENSBTAP00000028261-D1 Bos grunniens ENSBTAP00000028261-D1 I 0.860
HES1 Myotis lucifugus ENSMLUG00000008549 I 0.858
HES4 Canis familiaris ENSCAFG00000019350 I 0.843
ENSMPUG00000013915 Mustela putorius furo ENSMPUG00000013915 I 0.843
ENSMPUG00000006870 Mustela putorius furo ENSMPUG00000006870 I 0.840
ENSFALG00000007421 Ficedula albicollis ENSFALG00000007421 N 0.777
Cmyd_10015978 Chelonia mydas Cmyd_10015978 N 0.777