ENSGACG00000000628 (Gasterosteus aculeatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSGACG00000000628 T034353_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.914 0.981
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.914 0.981
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.914 0.981
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.914 0.981
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.914 0.981
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.914 0.981
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.914 0.981
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.914 0.981
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.912 0.942
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.912 0.942
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.912 0.942
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.912 0.942
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.912 0.942
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.912 0.942
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.912 0.942
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.912 0.942
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.912 0.942
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.912 0.942
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.912 0.942
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.912 0.942
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.912 0.942
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.912 0.942
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.912 0.865
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.912 0.865
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.912 0.865
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.884 0.904
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.884 0.904
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.884 0.904
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.884 0.865
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.884 0.865
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.884 0.865
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.884 0.865
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.884 0.865
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.884 0.865
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.884 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000000811 bHLH 427 480

Links

Other bHLH family TFs
Other Gasterosteus aculeatus TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R010721 Calypte anna Aan_R010721 I 0.000
ACEP13992 Atta cephalotes ACEP13992 I 0.000
Afo_R011879 Aptenodytes forsteri Afo_R011879 I 0.000
Alligator_sinensis_CCG021031.1 Alligator sinensis Alligator_sinensis_CCG021031.1 I 0.000
BGLB009094 Biomphalaria glabrata BGLB009094 I 0.000
Brh_R009745 Buceros rhinoceros Brh_R009745 I 0.000
CapteG228571 Capitella teleta CapteG228571 I 0.000
CGI_10012910 Crassostrea gigas CGI_10012910 I 0.000
Cmyd_10004045 Chelonia mydas Cmyd_10004045 I 0.000
DEAF1 Anolis carolinensis ENSACAG00000015102 I 0.000
ENSAMEG00000010672 Ailuropoda melanoleuca ENSAMEG00000010672 I 0.000
ENSAPLG00000011215 Anas platyrhynchos ENSAPLG00000011215 I 0.000
DEAF1 Canis familiaris ENSCAFG00000006569 I 0.000
DEAF1 Callithrix jacchus ENSCJAG00000011996 I 0.000
DEAF1 Cavia porcellus ENSCPOG00000006073 I 0.000
ENSCSAG00000010763 Chlorocebus sabaeus ENSCSAG00000010763 I 0.000
deaf1 Danio rerio ENSDARG00000088844 I 0.000
DEAF1 Dasypus novemcinctus ENSDNOG00000000274 I 0.000
Deaf1 Dipodomys ordii ENSDORG00000015737 I 0.000
DEAF1 Equus caballus ENSECAG00000010151 I 0.000
ENSFALG00000010923 Ficedula albicollis ENSFALG00000010923 I 0.000
DEAF1 Felis catus ENSFCAG00000007591 I 0.000
DEAF1 Homo sapiens ENSG00000177030 I 0.000
deaf1 Gasterosteus aculeatus ENSGACG00000008942 I 0.000
ENSGALG00000005089 Gallus gallus ENSGALG00000005089 I 0.000
DEAF1 Gorilla gorilla ENSGGOG00000014020 I 0.000
ENSGMOG00000000222 Gadus morhua ENSGMOG00000000222 I 0.000
ENSLACG00000014207 Latimeria chalumnae ENSLACG00000014207 I 0.000
DEAF1 Loxodonta africana ENSLAFG00000023242 I 0.000
ENSLOCG00000002360 Lepisosteus oculatus ENSLOCG00000002360 I 0.000
ENSMEUG00000005016 Macropus eugenii ENSMEUG00000005016 I 0.000
DEAF1 Meleagris gallopavo ENSMGAG00000003765 I 0.000
DEAF1 Microcebus murinus ENSMICG00000001602 I 0.000
DEAF1 Myotis lucifugus ENSMLUG00000026576 I 0.000
DEAF1 Macaca mulatta ENSMMUG00000002660 I 0.000
ENSMPUG00000008992 Mustela putorius furo ENSMPUG00000008992 I 0.000
Deaf1 Mus musculus ENSMUSG00000058886 I 0.000
ENSNLEG00000008479 Nomascus leucogenys ENSNLEG00000008479 I 0.000
ENSOARG00000006285 Ovis aries ENSOARG00000006285 I 0.000
DEAF1 Otolemur garnettii ENSOGAG00000006434 I 0.000
ENSONIG00000003936 Oreochromis niloticus ENSONIG00000003936 I 0.000
ENSOPRG00000002240 Ochotona princeps ENSOPRG00000002240 I 0.000
deaf1 Oryzias latipes ENSORLG00000019407 I 0.000
ENSP00000371846 Macaca fascicularis ENSP00000371846 I 0.000
ENSP00000371846-D1 Bos grunniens ENSP00000371846-D1 I 0.000
ENSPANG00000008597 Papio anubis ENSPANG00000008597 I 0.000
ENSPFOG00000014257 Poecilia formosa ENSPFOG00000014257 I 0.000
ENSPMAG00000004264 Petromyzon marinus ENSPMAG00000004264 I 0.000
ENSPSIG00000016545 Pelodiscus sinensis ENSPSIG00000016545 I 0.000
DEAF1 Pan troglodytes ENSPTRG00000003129 D 0.000
DEAF1 Pteropus vampyrus ENSPVAG00000006883 I 0.000
Deaf1 Rattus norvegicus ENSRNOG00000017960 I 0.000
ENSSHAG00000002042 Sarcophilus harrisii ENSSHAG00000002042 I 0.000
DEAF1 Sus scrofa ENSSSCG00000012850 I 0.000
ENSSTOG00000004165 Ictidomys tridecemlineatus ENSSTOG00000004165 I 0.000
DEAF1 Taeniopygia guttata ENSTGUG00000007185 I 0.000
deaf1 Tetraodon nigroviridis ENSTNIG00000016068 I 0.000
deaf1 Takifugu rubripes ENSTRUG00000002931 I 0.000
DEAF1 Tursiops truncatus ENSTTRG00000015418 I 0.000
ENSXMAG00000013352 Xiphophorus maculatus ENSXMAG00000013352 I 0.000
GB41654 Apis mellifera GB41654 I 0.000
Gfo_R011899 Geospiza fortis Gfo_R011899 I 0.000
HMEL013517 Heliconius melpomene HMEL013517 I 0.000
Hsal_03559--XP_395757.2_APIME Harpegnathos saltator Hsal_03559--XP_395757.2_APIME I 0.000
KGM_18605 Danaus plexippus KGM_18605 I 0.000
L798_01684 Zootermopsis nevadensis L798_01684 I 0.000
LDEC013410 Leptinotarsa decemlineata LDEC013410 I 0.000
LotgiG168359 Lottia gigantea LotgiG168359 I 0.000
Myotis_brandtii_DEAF1_10008461 Myotis brandtii Myotis_brandtii_DEAF1_10008461 I 0.000
Ogr05554 Ophisaurus gracilis Ogr05554 I 0.000
Pvit_08245 Pogona vitticeps Pvit_08245 I 0.000
TC000085 Tribolium castaneum TC000085 I 0.000
deaf1 Xenopus tropicalis XB-GENE-1216227 I 0.000
YQE_06816 Dendroctonus ponderosae YQE_06816 I 0.000