arntl1a (Gasterosteus aculeatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSGACG00000002445 T034361_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 0.981
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 0.981
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 0.981
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 0.981
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 0.981
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 0.981
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 0.981
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 0.981
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000003194 bHLH 74 127

Links

Other bHLH family TFs
Other Gasterosteus aculeatus TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000008501 Angiostrongylus cantonensis ACAC_0000008501 N
ACOC_0000493901 Angiostrongylus costaricensis ACOC_0000493901 N
ALUE_0000347301 Ascaris lumbricoides ALUE_0000347301 N
ANCCAN_14716 Ancylostoma caninum ANCCAN_14716 N
ANCCEY_13935 Ancylostoma ceylanicum ANCCEY_13935 N
ASIM_0001085501 Anisakis simplex ASIM_0001085501 N
ASU_10686 Ascaris suum ASU_10686 N
Bm6679 Brugia malayi Bm6679 N
CBG08484 Caenorhabditis briggsae CBG08484 N
CBN22200 Caenorhabditis brenneri CBN22200 N
CRE28107 Caenorhabditis remanei CRE28107 N
D918_02299 Trichuris suis D918_02299 N
DICVIV_02142 Dictyocaulus viviparus DICVIV_02142 N
DME_0000295201 Dracunculus medinensis DME_0000295201 N
EEL_0000257001 Elaeophora elaphi EEL_0000257001 N
GPUH_0000076201 Gongylonema pulchrum GPUH_0000076201 N
HPLM_0001248301 Haemonchus placei HPLM_0001248301 N
LOAG_15534 Loa loa LOAG_15534 N
MhA1_Contig3342.frz3.fgene1 Meloidogyne hapla MhA1_Contig3342.frz3.fgene1 I
nAv.1.0.1.g04294 Acanthocheilonema viteae nAv.1.0.1.g04294 N
NBR_0001111401 Nippostrongylus brasiliensis NBR_0001111401 I
nDi.2.2.2.g12190 Dirofilaria immitis nDi.2.2.2.g12190 N
nDi.2.2.2.g12300 Dirofilaria immitis nDi.2.2.2.g12300 I
NECAME_01451 Necator americanus NECAME_01451 N
nLs.2.1.2.g09328 Litomosoides sigmodontis nLs.2.1.2.g09328 N
nOo.2.0.1.g10305 Onchocerca ochengi nOo.2.0.1.g10305 N
nOo.2.0.1.g10313 Onchocerca ochengi nOo.2.0.1.g10313 N
nOo.2.0.1.g11935 Onchocerca ochengi nOo.2.0.1.g11935 N
PEQ_0000501101 Parascaris equorum PEQ_0000501101 N
PTRK_0001384100 Parastrongyloides trichosuri PTRK_0001384100 N
SMUV_0000990001 Syphacia muris SMUV_0000990001 N
SPAL_0001441800 Strongyloides papillosus SPAL_0001441800 N
SSTP_0000594700 Strongyloides stercoralis SSTP_0000594700 N
TCNE_0000897001 Toxocara canis TCNE_0000897001 N
TELCIR_08176 Teladorsagia circumcincta TELCIR_08176 N
TMUE_s0024003700 Trichuris muris TMUE_s0024003700 N
TMUE_s0040003800 Trichuris muris TMUE_s0040003800 N
TTRE_0000249401 Trichuris trichiura TTRE_0000249401 N
TTRE_0000375101 Trichuris trichiura TTRE_0000375101 N
grh-1 Caenorhabditis elegans WBGene00001707 N