CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0001111401
(
Nippostrongylus brasiliensis
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
NBR_0001111401
T199717_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
grh
M06209_2.00
Drosophila melanogaster
MTKGTTYHVY
RBHRAACMAK
B1H
Zhu et al.(2011)
grh_FlyReg_FBgn0259211
0.788
0.788
grh
M10616_2.00
Drosophila melanogaster
NNDDNBGGTDTHDHVN
NBDHDAHACCVNHHNN
Transfac
Matys et al.(2006)
I$ELF1_01
0.788
0.788
grh
M10617_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$GRH_01
0.788
0.788
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001111401-mRNA-1
Grainyhead
1
52
ISIATQCLSTDFSNQKGVKGLPLHVQIDTYDGDNDKQPFHRGYCQIKVFCDK
Links
Other
Grainyhead
family TFs
Other
Nippostrongylus brasiliensis
TFs
85 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000493901
Angiostrongylus costaricensis
ACOC_0000493901
N
1.000
DICVIV_02142
Dictyocaulus viviparus
DICVIV_02142
N
1.000
HPLM_0001248301
Haemonchus placei
HPLM_0001248301
N
1.000
TELCIR_08176
Teladorsagia circumcincta
TELCIR_08176
N
1.000
ANCCAN_14716
Ancylostoma caninum
ANCCAN_14716
N
0.981
ANCCEY_13935
Ancylostoma ceylanicum
ANCCEY_13935
N
0.981
NECAME_01451
Necator americanus
NECAME_01451
N
0.981
CBG08484
Caenorhabditis briggsae
CBG08484
N
0.942
CRE28107
Caenorhabditis remanei
CRE28107
N
0.923
grh-1
Caenorhabditis elegans
WBGene00001707
N
0.923
CBN22200
Caenorhabditis brenneri
CBN22200
N
0.904
CJA15586
Caenorhabditis japonica
CJA15586
N
0.865
BXY_1053400
Bursaphelenchus xylophilus
BXY_1053400
N
0.865
Bm6679
Brugia malayi
Bm6679
N
0.808
LOAG_16319
Loa loa
LOAG_16319
I
0.808
WBGene00238278
Onchocerca volvulus
WBGene00238278
N
0.808
LCUP010302
Lucilia cuprina
LCUP010302
I
0.808
ALUE_0000347301
Ascaris lumbricoides
ALUE_0000347301
N
0.808
ASIM_0001085501
Anisakis simplex
ASIM_0001085501
N
0.808
ASU_10686
Ascaris suum
ASU_10686
N
0.808
DME_0000295201
Dracunculus medinensis
DME_0000295201
N
0.808
EEL_0000257001
Elaeophora elaphi
EEL_0000257001
N
0.808
GPUH_0000076201
Gongylonema pulchrum
GPUH_0000076201
N
0.808
MhA1_Contig165.frz3.gene13
Meloidogyne hapla
MhA1_Contig165.frz3.gene13
N
0.808
MhA1_Contig3342.frz3.fgene1
Meloidogyne hapla
MhA1_Contig3342.frz3.fgene1
I
0.808
nAv.1.0.1.g04294
Acanthocheilonema viteae
nAv.1.0.1.g04294
N
0.808
nDi.2.2.2.g12300
Dirofilaria immitis
nDi.2.2.2.g12300
I
0.808
nLs.2.1.2.g09328
Litomosoides sigmodontis
nLs.2.1.2.g09328
N
0.808
nOo.2.0.1.g11008
Onchocerca ochengi
nOo.2.0.1.g11008
N
0.808
PTRK_0001384100
Parastrongyloides trichosuri
PTRK_0001384100
N
0.808
RSKR_0000378600
Rhabditophanes kr3021
RSKR_0000378600
N
0.808
SPAL_0001441800
Strongyloides papillosus
SPAL_0001441800
N
0.808
SSTP_0000594700
Strongyloides stercoralis
SSTP_0000594700
N
0.808
TCNE_0000897001
Toxocara canis
TCNE_0000897001
N
0.808
grh
Drosophila yakuba
FBgn0067967
I
0.788
GF11678
Drosophila ananassae
FBgn0088718
I
0.788
GG21828
Drosophila erecta
FBgn0114006
I
0.788
GH22029
Drosophila grimshawi
FBgn0129490
I
0.788
GI19118
Drosophila mojavensis
FBgn0141857
I
0.788
GL17227
Drosophila persimilis
FBgn0154830
I
0.788
GM21828
Drosophila sechellia
FBgn0176705
I
0.788
GD11322
Drosophila simulans
FBgn0183071
I
0.788
GK22232
Drosophila willistoni
FBgn0224217
I
0.788
grh
Drosophila melanogaster
FBgn0259211
D
0.788
GA30279
Drosophila pseudoobscura
FBgn0263821
I
0.788
PPA28053
Pristionchus pacificus
PPA28053
N
0.788
YQE_09165
Dendroctonus ponderosae
YQE_09165
I
0.788
MDOA000476
Musca domestica
MDOA000476
I
0.788
L892_g25006
Steinernema scapterisci
L892_g25006
N
0.788
scaffold354-EXSNAP2012.1
Pristionchus exspectatus
scaffold354-EXSNAP2012.1
N
0.788
SMUV_0000990001
Syphacia muris
SMUV_0000990001
N
0.788
BGIBMGA003479
Bombyx mori
BGIBMGA003479
I
0.769
HMEL013326
Heliconius melpomene
HMEL013326
I
0.769
KGM_04625
Danaus plexippus
KGM_04625
I
0.769
MCINX002723
Melitaea cinxia
MCINX002723
I
0.769
TC004589
Tribolium castaneum
TC004589
I
0.769
tetur01g12650
Tetranychus urticae
tetur01g12650
I
0.769
D918_02299
Trichuris suis
D918_02299
N
0.769
GPLIN_000211500
Globodera pallida
GPLIN_000211500
N
0.769
L596_g19549
Steinernema carpocapsae
L596_g19549
N
0.769
SBAD_0000224801
Soboliphyme baturini
SBAD_0000224801
N
0.769
TMUE_s0024003700
Trichuris muris
TMUE_s0024003700
N
0.769
TTRE_0000249401
Trichuris trichiura
TTRE_0000249401
N
0.769
TTRE_0000375101
Trichuris trichiura
TTRE_0000375101
N
0.769
ACYPI29050
Acyrthosiphon pisum
ACYPI29050
I
0.750
AGAP005564
Anopheles gambiae
AGAP005564
I
0.750
DAPPUDRAFT_64332
Daphnia pulex
DAPPUDRAFT_64332
I
0.750
ISCW008081
Ixodes scapularis
ISCW008081
I
0.750
SMAR000355
Strigamia maritima
SMAR000355
I
0.750
HHAL002635-PA
Halyomorpha halys
HHAL002635-PA
I
0.750
L889_g11263
Steinernema feltiae
L889_g11263
N
0.750
TMUE_s0040003800
Trichuris muris
TMUE_s0040003800
N
0.750
AAEL000577
Aedes aegypti
AAEL000577
I
0.731
RPRC012881
Rhodnius prolixus
RPRC012881
I
0.731
Hsal_11404--XP_394553.3_APIME
Harpegnathos saltator
Hsal_11404--XP_394553.3_APIME
I
0.731
CLEC003471
Cimex lectularius
CLEC003471
I
0.731
maker-nMf.1.1.scaf04793-snap-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf04793-snap-gene-0.5
N
0.731
ACEP20141
Atta cephalotes
ACEP20141
I
0.712
GRHL2
Erinaceus europaeus
ENSEEUG00000015263
I
0.712
GB46725
Apis mellifera
GB46725
I
0.712
NV11321
Nasonia vitripennis
NV11321
I
0.712
SINV20218
Solenopsis invicta
SINV20218
I
0.712
Cflo_10585--XP_394553.3_APIME
Camponotus floridanus
Cflo_10585--XP_394553.3_APIME
I
0.712
BGLB002457
Biomphalaria glabrata
BGLB002457
N
0.712
L893_g6531
Steinernema glaseri
L893_g6531
N
0.712