CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAR000355
(
Strigamia maritima
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
SMAR000355
T199445_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
grh
M06209_2.00
Drosophila melanogaster
MTKGTTYHVY
RBHRAACMAK
B1H
Zhu et al.(2011)
grh_FlyReg_FBgn0259211
0.712
0.712
grh
M10616_2.00
Drosophila melanogaster
NNDDNBGGTDTHDHVN
NBDHDAHACCVNHHNN
Transfac
Matys et al.(2006)
I$ELF1_01
0.712
0.712
grh
M10617_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$GRH_01
0.712
0.712
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR000355-PA
Grainyhead
249
473
PSARRPWNDFSRNSEADKVQIPKLYSSVGFRYYLEAPISTSQRREDDRITYINKGQFYGITLEYIPDGDKPLKSHTVKSMIMLVFREEKSSEEEVKAWQFWHGRQHSHNKCLTLIRLVAFRYENSSGLVGCIEEVAHNTIAIYWNPLESPAKINVAVQCLSTDFSNQKGVKGLPLHLQIDTFDDIRDTGAPPVHRAYCQIKVFCDKGAERKTRDEERRAAKRKLS
Links
Other
Grainyhead
family TFs
Other
Strigamia maritima
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGAP005564
Anopheles gambiae
AGAP005564
I
0.768
ACYPI29050
Acyrthosiphon pisum
ACYPI29050
I
0.754
tetur01g12650
Tetranychus urticae
tetur01g12650
I
0.752
HMEL013326
Heliconius melpomene
HMEL013326
I
0.751
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
0.750
nDi.2.2.2.g12300
Dirofilaria immitis
nDi.2.2.2.g12300
I
0.745
AEPI006364
Anopheles epiroticus
AEPI006364
I
0.740
AAEL000577
Aedes aegypti
AAEL000577
I
0.739
MhA1_Contig3342.frz3.fgene1
Meloidogyne hapla
MhA1_Contig3342.frz3.fgene1
I
0.736
LLOJ002492
Lutzomyia longipalpis
LLOJ002492
I
0.724
GF11678
Drosophila ananassae
FBgn0088718
I
0.723
GI19118
Drosophila mojavensis
FBgn0141857
I
0.721
grh
Drosophila melanogaster
FBgn0259211
D
0.721
TC004589
Tribolium castaneum
TC004589
I
0.721
MDOA000476
Musca domestica
MDOA000476
I
0.721
DAPPUDRAFT_64332
Daphnia pulex
DAPPUDRAFT_64332
I
0.716
grh
Drosophila yakuba
FBgn0067967
I
0.712
GG21828
Drosophila erecta
FBgn0114006
I
0.712
GH22029
Drosophila grimshawi
FBgn0129490
I
0.712
GL17227
Drosophila persimilis
FBgn0154830
I
0.712
GM21828
Drosophila sechellia
FBgn0176705
I
0.712
GD11322
Drosophila simulans
FBgn0183071
I
0.712
GK22232
Drosophila willistoni
FBgn0224217
I
0.712
GA30279
Drosophila pseudoobscura
FBgn0263821
I
0.712
MCINX002723
Melitaea cinxia
MCINX002723
I
0.712
GB46725
Apis mellifera
GB46725
I
0.709
KGM_04625
Danaus plexippus
KGM_04625
I
0.707
YQE_09165
Dendroctonus ponderosae
YQE_09165
I
0.707
ISCW008081
Ixodes scapularis
ISCW008081
I
0.703
ACEP20141
Atta cephalotes
ACEP20141
I
0.700