twist3 (Gasterosteus aculeatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSGACG00000007963 T034403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TWIST1
M08052_2.00 		Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN		 ChIP-seq
Mathelier et al.(2014)
MA1123.1 		0.883 0.904
TWIST1
M08722_2.00 		Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A 		0.883 0.904
Twist1
M08766_2.00 		Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B 		0.883 0.904
TWIST1
M09831_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6_01 		0.883 0.904
TWIST1
M09832_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6 		0.883 0.904
Twist2
M01718_2.00 		Mus musculus
NACATATGKN
NMCATATGTN		 PBM
Weirauch et al.(2014)
pTH5033 		0.883 0.885
twi
M03605_2.00 		Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK		 SELEX
Nitta et al.(2015)
twi_1 		0.879 0.865
twi
M03606_2.00 		Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK		 SELEX
Nitta et al.(2015)
twi_2 		0.879 0.865
twi
M05955_2.00 		Drosophila melanogaster
VCCAGATGTB
VACATCTGGB		 B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900 		0.879 0.865
twi
M05956_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900 		0.879 0.865
twi
M07538_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 DNaseI footprinting
Mathelier et al.(2014)
MA0249.1 		0.879 0.865
twi
M09657_2.00 		Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT		 Misc
Kulakovskiy et al.(2009)
twi 		0.879 0.865
twi
M09892_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TWI_Q6 		0.879 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000010539 bHLH 97 148

Links

Other bHLH family TFs
Other Gasterosteus aculeatus TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2BS_74269A4C5 Triticum aestivum Traes_2BS_74269A4C5 N
Traes_3B_224A6B7E5 Triticum aestivum Traes_3B_224A6B7E5 N
Traes_5BL_4B55FFD72 Triticum aestivum Traes_5BL_4B55FFD72 N
Traes_5BL_B26F674CF Triticum aestivum Traes_5BL_B26F674CF N
Traes_6AS_480364CD5 Triticum aestivum Traes_6AS_480364CD5 N
Traes_6AS_EE8BA0A57 Triticum aestivum Traes_6AS_EE8BA0A57 N
Traes_6BS_7C28F07CE Triticum aestivum Traes_6BS_7C28F07CE N
Traes_6BS_82F5BF11F Triticum aestivum Traes_6BS_82F5BF11F N
Traes_6BS_9FAF15CD0 Triticum aestivum Traes_6BS_9FAF15CD0 N
Traes_6BS_A8901EA1F Triticum aestivum Traes_6BS_A8901EA1F N
Traes_6BS_CBD931158 Triticum aestivum Traes_6BS_CBD931158 N
Traes_6DS_931C28AF6 Triticum aestivum Traes_6DS_931C28AF6 N
TRIUR3_27490 Triticum urartu TRIUR3_27490 N