CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TCF21
(
Gorilla gorilla
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGGOG00000005460
T034585_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcf21
M01746_2.00
Mus musculus
RMCAKMTGK
MCAKMTGKY
PBM
Weirauch et al.(2014)
pTH5087
0.914
1.000
Tcf21
M02819_2.00
Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB
SELEX
Jolma et al.(2013)
Tcf21_1
0.914
1.000
TCF21
M04092_2.00
Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1
0.914
1.000
TCF21
M04093_2.00
Homo sapiens
NRCCATATGKYV
BRMCATATGGYN
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2
0.914
1.000
TCF21
M04094_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1
0.914
1.000
TCF21
M04095_2.00
Homo sapiens
BACCATATGKYV
BRMCATATGGTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2
0.914
1.000
Msc
M01730_2.00
Mus musculus
NVCRKMYGBN
NVCRKMYGBN
PBM
Weirauch et al.(2014)
pTH5112
0.914
0.981
MSC
M02801_2.00
Homo sapiens
AACAGCTGTT
AACAGCTGTT
SELEX
Jolma et al.(2013)
MSC_1
0.914
0.981
MSC
M04183_2.00
Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1
0.914
0.981
MSC
M04184_2.00
Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2
0.914
0.981
MSC
M04187_2.00
Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1
0.914
0.981
MSC
M04188_2.00
Homo sapiens
BRMCATATGKYN
NRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2
0.914
0.981
MSC
M04185_2.00
Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1
0.914
0.981
MSC
M04186_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2
0.914
0.981
MSC
M04189_2.00
Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1
0.914
0.981
MSC
M04190_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000005345
bHLH
80
132
QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLR
Links
Other
bHLH
family TFs
Other
Gorilla gorilla
TFs
184 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_01192
Schistosoma haematobium
A_01192
I
0.000
csin112160
Clonorchis sinensis
csin112160
N
0.000
ECANG7_07506
Echinococcus canadensis
ECANG7_07506
I
0.000
ECPE_0001369301
Echinostoma caproni
ECPE_0001369301
I
0.000
EmuJ_000377500
Echinococcus multilocularis
EmuJ_000377500
I
0.000
HDID_0000576901
Hymenolepis diminuta
HDID_0000576901
I
0.000
HmN_000858800
Hymenolepis microstoma
HmN_000858800
I
0.000
HNAJ_0000775201
Hymenolepis nana
HNAJ_0000775201
I
0.000
MCOS_0000609801
Mesocestoides corti
MCOS_0000609801
I
0.000
SCUD_0000460501
Schistosoma curassoni
SCUD_0000460501
I
0.000
Sjc_0026780
Schistosoma japonicum
Sjc_0026780
I
0.000
Smp_097730
Schistosoma mansoni
Smp_097730
I
0.000
SMRZ_0002507801
Schistosoma margrebowiei
SMRZ_0002507801
I
0.000
SMTD_0001950801
Schistosoma mattheei
SMTD_0001950801
I
0.000
SMU15039528
Schmidtea mediterranea
SMU15039528
N
0.000
SPER_0002407601
Spirometra erinaceieuropaei
SPER_0002407601
N
0.000
SPER_0003232401
Spirometra erinaceieuropaei
SPER_0003232401
N
0.000
SROB_0002013401
Schistosoma rodhaini
SROB_0002013401
I
0.000
T265_07052
Opisthorchis viverrini
T265_07052
N
0.000
TASK_0000457101
Taenia asiatica
TASK_0000457101
I
0.000
TsM_000925700
Taenia solium
TsM_000925700
I
0.000
TTAC_0000870401
Hydatigera taeniaeformis
TTAC_0000870401
I
0.000