CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARNT2
(
Gorilla gorilla
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGGOG00000012245
T034616_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arnt2
M01720_2.00
Mus musculus
NCAYRTGMNN
NNKCAYRTGN
PBM
Weirauch et al.(2014)
pTH5159
0.914
1.000
ARNT2
M04170_2.00
Homo sapiens
RDCACGTGMN
NKCACGTGHY
SELEX
Yin et al.(2017)
ARNT2_eDBD_HT-SELEX
0.914
1.000
Arnt2
M09888_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT2_01
0.914
1.000
Arnt
M01719_2.00
Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN
PBM
Weirauch et al.(2014)
pTH5111
0.862
0.944
ARNT
M08732_2.00
Homo sapiens
NKRCGTGMN
NKCACGYMN
Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B
0.862
0.944
ARNT
M09459_2.00
Homo sapiens
KCACGTNN
NNACGTGM
Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937
0.862
0.944
ARNT
M09863_2.00
Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN
Transfac
Matys et al.(2006)
V$ARNT_01
0.862
0.944
ARNT
M09864_2.00
Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB
Transfac
Matys et al.(2006)
V$ARNT_02
0.862
0.944
ARNT
M09865_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6_01
0.862
0.944
ARNT
M09866_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6
0.862
0.944
tgo
M06005_2.00
Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY
B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06006_2.00
Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS
B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014
0.862
0.907
tgo
M06007_2.00
Drosophila melanogaster
KCACGTGAC
GTCACGTGM
B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06008_2.00
Drosophila melanogaster
RTACGTGAC
GTCACGTAY
B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06009_2.00
Drosophila melanogaster
VWACGTGACY
RGTCACGTWB
B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06010_2.00
Drosophila melanogaster
TGCGTGAC
GTCACGCA
B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06011_2.00
Drosophila melanogaster
RCACGTGAC
GTCACGTGY
B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06012_2.00
Drosophila melanogaster
VTACGTGACB
VGTCACGTAB
B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014
0.862
0.907
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000011957
bHLH
64
117
SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMR
Links
Other
bHLH
family TFs
Other
Gorilla gorilla
TFs
175 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000017952
Astyanax mexicanus
ENSAMXG00000017952
I
0.000
ENSCHOG00000012250
Choloepus hoffmanni
ENSCHOG00000012250
N
0.000
MBD3
Cavia porcellus
ENSCPOG00000026210
N
0.000
ENSCSAG00000011976
Chlorocebus sabaeus
ENSCSAG00000011976
N
0.000
MBD3
Homo sapiens
ENSG00000071655
N
0.000
MBD2
Homo sapiens
ENSG00000134046
D
0.000
MBD3
Gorilla gorilla
ENSGGOG00000012396
N
0.000
ENSMMUG00000003136
Macaca mulatta
ENSMMUG00000003136
I
0.000
MBD3
Macaca mulatta
ENSMMUG00000009014
N
0.000
Mbd2
Mus musculus
ENSMUSG00000024513
D
0.000
ENSNLEG00000001734
Nomascus leucogenys
ENSNLEG00000001734
N
0.000
MBD3
Otolemur garnettii
ENSOGAG00000024563
N
0.000
MBD3
Oryzias latipes
ENSORLG00000004850
N
0.000
ENSPANG00000015324
Papio anubis
ENSPANG00000015324
N
0.000
MBD3
Procavia capensis
ENSPCAG00000006257
N
0.000
MBD3
Pan troglodytes
ENSPTRG00000010209
N
0.000
ENSSTOG00000015870
Ictidomys tridecemlineatus
ENSSTOG00000015870
N
0.000
MBD2
Tursiops truncatus
ENSTTRG00000009635
N
0.000
Ogr00377
Ophisaurus gracilis
Ogr00377
N
0.000