CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000002790
(
Gadus morhua
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGMOG00000002790
T034659_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TWIST1
M08052_2.00
Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN
ChIP-seq
Mathelier et al.(2014)
MA1123.1
0.903
0.942
TWIST1
M08722_2.00
Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW
Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A
0.903
0.942
Twist1
M08766_2.00
Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW
Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B
0.903
0.942
TWIST1
M09831_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6_01
0.903
0.942
TWIST1
M09832_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6
0.903
0.942
Twist2
M01718_2.00
Mus musculus
NACATATGKN
NMCATATGTN
PBM
Weirauch et al.(2014)
pTH5033
0.903
0.904
twi
M03605_2.00
Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK
SELEX
Nitta et al.(2015)
twi_1
0.859
0.885
twi
M03606_2.00
Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK
SELEX
Nitta et al.(2015)
twi_2
0.859
0.885
twi
M05955_2.00
Drosophila melanogaster
VCCAGATGTB
VACATCTGGB
B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900
0.859
0.885
twi
M05956_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900
0.859
0.885
twi
M07538_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
DNaseI footprinting
Mathelier et al.(2014)
MA0249.1
0.859
0.885
twi
M09657_2.00
Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT
Misc
Kulakovskiy et al.(2009)
twi
0.859
0.885
twi
M09892_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TWI_Q6
0.859
0.885
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000002930
bHLH
72
123
QRVMANVRERQRTQSLNEAFTSLRKIIPTLPSDKLSKIQTLKLASRYIDFLY
Links
Other
bHLH
family TFs
Other
Gadus morhua
TFs
233 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_05630
Beauveria bassiana
BBA_05630
N
0.000
CCM_04623
Cordyceps militaris
CCM_04623
N
0.000
CGGC5_5177
Colletotrichum gloeosporioides
CGGC5_5177
N
0.000
CH063_01997
Colletotrichum higginsianum
CH063_01997
N
0.000
Cob_09844
Colletotrichum orbiculare
Cob_09844
N
0.000
CSUB01_01955
Colletotrichum sublineola
CSUB01_01955
N
0.000
e_gw1.2.1437.1
Nectria haematococca
e_gw1.2.1437.1
N
0.000
FFUJ_06104
Fusarium fujikuroi
FFUJ_06104
N
0.000
fgenesh1_kg.C_scaffold_15000017
Cryphonectria parasitica
fgenesh1_kg.C_scaffold_15000017
N
0.000
FGRRES_08397
Fusarium graminearum
FGRRES_08397
N
0.000
FOXG_03196
Fusarium oxysporum
FOXG_03196
N
0.000
FPSE_09014
Fusarium pseudograminearum
FPSE_09014
N
0.000
FVEG_02065
Fusarium verticillioides
FVEG_02065
N
0.000
GLRG_05399
Colletotrichum graminicola
GLRG_05399
N
0.000
MAC_03499
Metarhizium acridum
MAC_03499
N
0.000
MAJ_00122
Metarhizium majus
MAJ_00122
N
0.000
MAM_00759
Metarhizium album
MAM_00759
N
0.000
MANI_028548
Metarhizium anisopliae
MANI_028548
N
0.000
MBR_02516
Metarhizium brunneum
MBR_02516
N
0.000
MGU_00497
Metarhizium guizhouense
MGU_00497
N
0.000
NechaG35170
Fusarium solani
NechaG35170
N
0.000
OCS_03494
Ophiocordyceps sinensis
OCS_03494
N
0.000
S40285_07596
Stachybotrys chlorohalonata
S40285_07596
N
0.000
S40288_03002
Stachybotrys chartarum
S40288_03002
N
0.000
TRIREDRAFT_79673
Trichoderma reesei
TRIREDRAFT_79673
N
0.000
TRIVIDRAFT_76678
Trichoderma virens
TRIVIDRAFT_76678
N
0.000
UCRPA7_4653
Togninia minima
UCRPA7_4653
N
0.000
VDAG_05574
Verticillium dahliae
VDAG_05574
N
0.000
VDBG_08003
Verticillium alfalfae
VDBG_08003
N
0.000
VDBG_08003
Verticillium albo atrum
VDBG_08003
N
0.000
VHEMI06839
Torrubiella hemipterigena
VHEMI06839
N
0.000
X797_000555
Metarhizium robertsii
X797_000555
N
0.000