FERD3L (Meleagris gallopavo)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMGAG00000015843 T035223_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FERD3L
M04140_2.00 		Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1 		0.914 0.981
FERD3L
M04141_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2 		0.914 0.981
FERD3L
M04142_2.00 		Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1 		0.914 0.981
FERD3L
M04143_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2 		0.914 0.981
Fer3
M05993_2.00 		Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC		 B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937 		0.890 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000016784 bHLH 99 151

Links

Other bHLH family TFs
Other Meleagris gallopavo TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000493901 Angiostrongylus costaricensis ACOC_0000493901 N 0.000
ALUE_0000347301 Ascaris lumbricoides ALUE_0000347301 N 0.000
ANCCAN_14716 Ancylostoma caninum ANCCAN_14716 N 0.000
ANCCEY_13935 Ancylostoma ceylanicum ANCCEY_13935 N 0.000
ASIM_0001085501 Anisakis simplex ASIM_0001085501 N 0.000
Bm6679 Brugia malayi Bm6679 N 0.000
CBG08484 Caenorhabditis briggsae CBG08484 N 0.000
CBN22200 Caenorhabditis brenneri CBN22200 N 0.000
CJA15586 Caenorhabditis japonica CJA15586 N 0.000
CRE28107 Caenorhabditis remanei CRE28107 N 0.000
D918_02299 Trichuris suis D918_02299 N 0.000
DICVIV_02142 Dictyocaulus viviparus DICVIV_02142 N 0.000
DME_0000295201 Dracunculus medinensis DME_0000295201 N 0.000
GPUH_0000076201 Gongylonema pulchrum GPUH_0000076201 N 0.000
HPLM_0001248301 Haemonchus placei HPLM_0001248301 N 0.000
nAv.1.0.1.g04294 Acanthocheilonema viteae nAv.1.0.1.g04294 N 0.000
NBR_0001111401 Nippostrongylus brasiliensis NBR_0001111401 I 0.000
nDi.2.2.2.g12190 Dirofilaria immitis nDi.2.2.2.g12190 N 0.000
NECAME_01451 Necator americanus NECAME_01451 N 0.000
nLs.2.1.2.g09328 Litomosoides sigmodontis nLs.2.1.2.g09328 N 0.000
PTRK_0001384100 Parastrongyloides trichosuri PTRK_0001384100 N 0.000
RSKR_0000378600 Rhabditophanes kr3021 RSKR_0000378600 N 0.000
SMUV_0000990001 Syphacia muris SMUV_0000990001 N 0.000
SPAL_0001441800 Strongyloides papillosus SPAL_0001441800 N 0.000
SSTP_0000594700 Strongyloides stercoralis SSTP_0000594700 N 0.000
TCNE_0000897001 Toxocara canis TCNE_0000897001 N 0.000
TELCIR_08176 Teladorsagia circumcincta TELCIR_08176 N 0.000
TMUE_s0024003700 Trichuris muris TMUE_s0024003700 N 0.000
TMUE_s0040003800 Trichuris muris TMUE_s0040003800 N 0.000
grh-1 Caenorhabditis elegans WBGene00001707 N 0.000
WBGene00238278 Onchocerca volvulus WBGene00238278 N 0.000