Atoh1 (Mus musculus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMUSG00000073043 T035754_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atoh1
M01754_2.00		 Mus musculus
NMCATATGKN
NMCATATGKN		 PBM
Weirauch et al.(2014)
pTH5074		 (Direct) (Direct)
Atoh1
M02820_2.00		 Mus musculus
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
Atoh1_1		 (Direct) (Direct)
Atoh1
M08779_2.00		 Mus musculus
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B		 (Direct) (Direct)
Atoh1
M09480_2.00		 Mus musculus
NNRVCAKMTGBY
RVCAKMTGBYNN		 Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATOH1
M04166_2.00 		Homo sapiens
RACAGCTGYY
RRCAGCTGTY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1 		0.914 1.000
ATOH1
M04167_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2 		0.914 1.000
ATOH1
M08738_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B 		0.914 1.000
ATOH1
M09877_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MATH1_Q2 		0.914 1.000
ATOH1
M04168_2.00 		Homo sapiens
AACAGCTGTY
RACAGCTGTT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
ATOH1
M04169_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01754_2.00 bHLH 16 68

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000098903 bHLH 157 209

Links

Other bHLH family TFs
Other Mus musculus TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013000 Ailuropoda melanoleuca ENSAMEG00000013000 I
ENSCJAG00000032790 Callithrix jacchus ENSCJAG00000032790 I
ENSDNOG00000031015 Dasypus novemcinctus ENSDNOG00000031015 I
ENSDNOG00000048270 Dasypus novemcinctus ENSDNOG00000048270 I
ENSGGOG00000027412 Gorilla gorilla ENSGGOG00000027412 I
ENSLAFG00000026006 Loxodonta africana ENSLAFG00000026006 I
ENSMPUG00000003600 Mustela putorius furo ENSMPUG00000003600 I
Cphx3 Mus musculus ENSMUSG00000094817 I
Cphx1 Mus musculus ENSMUSG00000095975 D
Cphx2 Mus musculus ENSMUSG00000098463 I
ENSNLEG00000013097 Nomascus leucogenys ENSNLEG00000013097 I
Cphx Rattus norvegicus ENSRNOG00000025433 I