TCF4 (Pan troglodytes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPTRG00000010040 T037027_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.914 0.962
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.914 0.962
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.914 0.962
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.914 0.962
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.914 0.962
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.914 0.962
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.914 0.962
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.914 0.962
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.912 0.923
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.912 0.923
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.912 0.923
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.912 0.923
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.912 0.923
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.912 0.923
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.912 0.923
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.912 0.923
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.912 0.923
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.912 0.923
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.912 0.923
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.912 0.923
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.912 0.923
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.912 0.923
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.912 0.846
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.912 0.846
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.912 0.846
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.884 0.885
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.884 0.885
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.884 0.885
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.884 0.846
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.884 0.846
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.884 0.846
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.884 0.846
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.884 0.846
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.884 0.846
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.884 0.846
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000040814 bHLH 652 705

Links

Other bHLH family TFs
Other Pan troglodytes TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AATE014785 Anopheles atroparvus AATE014785 I 0.000
ADIR005096 Anopheles dirus ADIR005096 I 0.000
AEPI009051 Anopheles epiroticus AEPI009051 I 0.000
AFAF016726 Anopheles farauti AFAF016726 I 0.000
Afo_R007655 Aptenodytes forsteri Afo_R007655 I 0.000
AFUN000829 Anopheles funestus AFUN000829 I 0.000
Alligator_sinensis_CCG020663.1 Alligator sinensis Alligator_sinensis_CCG020663.1 I 0.000
AMEC017008 Anopheles melas AMEC017008 I 0.000
AQUA011339 Anopheles quadriannulatus AQUA011339 I 0.000
BGIBMGA003472 Bombyx mori BGIBMGA003472 I 0.000
BGLB009342 Biomphalaria glabrata BGLB009342 I 0.000
CapteG88605 Capitella teleta CapteG88605 I 0.000
CapteG88932 Capitella teleta CapteG88932 I 0.000
CGI_10017200 Crassostrea gigas CGI_10017200 I 0.000
CLEC002917 Cimex lectularius CLEC002917 I 0.000
CLEC012864 Cimex lectularius CLEC012864 I 0.000
Cmyd_10007604 Chelonia mydas Cmyd_10007604 I 0.000
DAPPUDRAFT_309730 Daphnia pulex DAPPUDRAFT_309730 I 0.000
ARNT Anolis carolinensis ENSACAG00000011254 I 0.000
ENSAMEG00000001200 Ailuropoda melanoleuca ENSAMEG00000001200 I 0.000
ENSAMXG00000012473 Astyanax mexicanus ENSAMXG00000012473 I 0.000
ENSAPLG00000013397 Anas platyrhynchos ENSAPLG00000013397 I 0.000
ARNT Bos taurus ENSBTAG00000021037 I 0.000
ENSBTAP00000028023-D1 Bos grunniens ENSBTAP00000028023-D1 I 0.000
ARNT Canis familiaris ENSCAFG00000012149 I 0.000
ARNT Choloepus hoffmanni ENSCHOG00000010045 I 0.000
arnt Ciona intestinalis ENSCING00000008102 I 0.000
ARNT Callithrix jacchus ENSCJAG00000006839 I 0.000
ARNT Cavia porcellus ENSCPOG00000014578 I 0.000
ENSCSAG00000018038 Chlorocebus sabaeus ENSCSAG00000018038 I 0.000
ENSCSAVG00000010893 Ciona savignyi ENSCSAVG00000010893 I 0.000
arnt Danio rerio ENSDARG00000021855 I 0.000
ARNT Dasypus novemcinctus ENSDNOG00000005093 I 0.000
ENSDORG00000014121 Dipodomys ordii ENSDORG00000014121 I 0.000
ARNT Equus caballus ENSECAG00000009602 I 0.000
ARNT Erinaceus europaeus ENSEEUG00000007500 I 0.000
ARNT Echinops telfairi ENSETEG00000001280 I 0.000
ARNT Felis catus ENSFCAG00000003644 I 0.000
ARNT Homo sapiens ENSG00000143437 D 0.000
arnt Gasterosteus aculeatus ENSGACG00000011686 I 0.000
ARNT Gallus gallus ENSGALG00000000751 I 0.000
ARNT Gorilla gorilla ENSGGOG00000015383 I 0.000
ENSGMOG00000006058 Gadus morhua ENSGMOG00000006058 I 0.000
ARNT Loxodonta africana ENSLAFG00000011282 I 0.000
ENSMEUG00000003050 Macropus eugenii ENSMEUG00000003050 I 0.000
ARNT Meleagris gallopavo ENSMGAG00000000943 I 0.000
ARNT Microcebus murinus ENSMICG00000005872 I 0.000
ARNT Myotis lucifugus ENSMLUG00000003502 I 0.000
ARNT Macaca mulatta ENSMMUG00000000541 I 0.000
ARNT Monodelphis domestica ENSMODG00000018814 I 0.000
ENSMPUG00000004365 Mustela putorius furo ENSMPUG00000004365 I 0.000
Arnt Mus musculus ENSMUSG00000015522 D 0.000
ENSNLEG00000009971 Nomascus leucogenys ENSNLEG00000009971 I 0.000
ARNT Ornithorhynchus anatinus ENSOANG00000004580 I 0.000
ENSOARG00000020870 Ovis aries ENSOARG00000020870 I 0.000
ARNT Oryctolagus cuniculus ENSOCUG00000013582 I 0.000
ARNT Otolemur garnettii ENSOGAG00000004523 I 0.000
ENSONIG00000006431 Oreochromis niloticus ENSONIG00000006431 I 0.000
ARNT Ochotona princeps ENSOPRG00000010374 I 0.000
ARNT Oryzias latipes ENSORLG00000010551 I 0.000
ENSP00000351407 Macaca fascicularis ENSP00000351407 I 0.000
ENSPANG00000016773 Papio anubis ENSPANG00000016773 I 0.000
ARNT Procavia capensis ENSPCAG00000008485 I 0.000
ENSPFOG00000005237 Poecilia formosa ENSPFOG00000005237 I 0.000
ENSPPYG00000000888 Pongo abelii ENSPPYG00000000888 I 0.000
ENSPSIG00000008480 Pelodiscus sinensis ENSPSIG00000008480 I 0.000
ARNT Pan troglodytes ENSPTRG00000001266 I 0.000
ARNT Pteropus vampyrus ENSPVAG00000004354 I 0.000
Arnt Rattus norvegicus ENSRNOG00000031174 I 0.000
ARNT Sorex araneus ENSSARG00000005490 I 0.000
ENSSHAG00000012227 Sarcophilus harrisii ENSSHAG00000012227 I 0.000
ARNT Sus scrofa ENSSSCG00000006646 I 0.000
ENSSTOG00000013876 Ictidomys tridecemlineatus ENSSTOG00000013876 I 0.000
ARNT Taeniopygia guttata ENSTGUG00000004647 I 0.000
ARNT Tetraodon nigroviridis ENSTNIG00000008064 I 0.000
ARNT Takifugu rubripes ENSTRUG00000014504 I 0.000
ENSTSYG00000006074 Tarsius syrichta ENSTSYG00000006074 I 0.000
ARNT Tursiops truncatus ENSTTRG00000007388 I 0.000
ARNT Vicugna pacos ENSVPAG00000005439 I 0.000
ENSXMAG00000016545 Xiphophorus maculatus ENSXMAG00000016545 I 0.000
estExt_fgenesh2_pg.C_1460068 Branchiostoma floridae estExt_fgenesh2_pg.C_1460068 I 0.000
GA11313 Drosophila pseudoobscura FBgn0071367 I 0.000
GF18433 Drosophila ananassae FBgn0095451 I 0.000
GG17399 Drosophila erecta FBgn0109625 I 0.000
GH18221 Drosophila grimshawi FBgn0125689 I 0.000
GI10175 Drosophila mojavensis FBgn0132941 I 0.000
GL12493 Drosophila persimilis FBgn0150099 I 0.000
GM26289 Drosophila sechellia FBgn0181143 I 0.000
GD20825 Drosophila simulans FBgn0192287 I 0.000
GJ10876 Drosophila virilis FBgn0198144 I 0.000
GK11420 Drosophila willistoni FBgn0213431 I 0.000
GE24803 Drosophila yakuba FBgn0241904 I 0.000
tgo Drosophila melanogaster FBgn0264075 D 0.000
Gfo_R011690 Geospiza fortis Gfo_R011690 I 0.000
HHAL008564-PA Halyomorpha halys HHAL008564-PA I 0.000
HHAL009348-PA Halyomorpha halys HHAL009348-PA I 0.000
HMEL013329 Heliconius melpomene HMEL013329 I 0.000
ISCW023999 Ixodes scapularis ISCW023999 I 0.000
KGM_04621 Danaus plexippus KGM_04621 I 0.000
LCUP007387 Lucilia cuprina LCUP007387 I 0.000
LDEC004670 Leptinotarsa decemlineata LDEC004670 I 0.000
LLOJ003291 Lutzomyia longipalpis LLOJ003291 I 0.000
MCINX011636 Melitaea cinxia MCINX011636 I 0.000
MDOA015409 Musca domestica MDOA015409 I 0.000
Myotis_brandtii_ARNT_10031836 Myotis brandtii Myotis_brandtii_ARNT_10031836 I 0.000
NEMVEDRAFT_v1g116698 Nematostella vectensis NEMVEDRAFT_v1g116698 N 0.000
NV11924 Nasonia vitripennis NV11924 I 0.000
Ocbimv22015061m.g Octopus bimaculoides Ocbimv22015061m.g I 0.000
PHUM505970 Pediculus humanus PHUM505970 I 0.000
Pvit_04978 Pogona vitticeps Pvit_04978 I 0.000
PXEA_0001988401 Protopolystoma xenopodis PXEA_0001988401 I 0.000
RPRC004351 Rhodnius prolixus RPRC004351 I 0.000
Sakowv30011795m.g Saccoglossus kowalevskii Sakowv30011795m.g I 0.000
SINV17691 Solenopsis invicta SINV17691 I 0.000
SMU15010696 Schmidtea mediterranea SMU15010696 I 0.000
SPU_000129 Strongylocentrotus purpuratus SPU_000129 I 0.000
Tal_R007034 Tyto alba Tal_R007034 I 0.000
TASK_0000812801 Taenia asiatica TASK_0000812801 N 0.000
TC004710 Tribolium castaneum TC004710 I 0.000
tetur01g08330 Tetranychus urticae tetur01g08330 I 0.000
TTAC_0000419001 Hydatigera taeniaeformis TTAC_0000419001 N 0.000
arnt.L Xenopus laevis XB-GENE-17346408 I 0.000
arnt Xenopus tropicalis XB-GENE-855450 I 0.000
arnt.S Xenopus laevis XB-GENE-866594 I 0.000