arnt (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000021855 T033660_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.884 0.981
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.884 0.981
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.884 0.981
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.884 0.981
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.884 0.981
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.884 0.981
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.884 0.981
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.884 0.907
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.884 0.907
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000028315 bHLH 64 117
ENSDARP00000076292 bHLH 64 117
ENSDARP00000107928 bHLH 64 117
ENSDARP00000110017 bHLH 64 117
ENSDARP00000112110 bHLH 64 117

Links

Other bHLH family TFs
Other Danio rerio TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIBMGA003472 Bombyx mori BGIBMGA003472 I 0.884
DAPPUDRAFT_309730 Daphnia pulex DAPPUDRAFT_309730 I 0.884
ARNT Anolis carolinensis ENSACAG00000011254 I 0.884
ENSAMEG00000001200 Ailuropoda melanoleuca ENSAMEG00000001200 I 0.884
ENSAPLG00000013397 Anas platyrhynchos ENSAPLG00000013397 I 0.884
ARNT Bos taurus ENSBTAG00000021037 I 0.884
ARNT Canis familiaris ENSCAFG00000012149 I 0.884
ARNT Choloepus hoffmanni ENSCHOG00000010045 I 0.884
arnt Ciona intestinalis ENSCING00000008102 I 0.884
ARNT Callithrix jacchus ENSCJAG00000006839 I 0.884
ARNT Cavia porcellus ENSCPOG00000014578 I 0.884
ENSCSAG00000018038 Chlorocebus sabaeus ENSCSAG00000018038 I 0.884
ENSCSAVG00000010893 Ciona savignyi ENSCSAVG00000010893 I 0.884
ARNT Dasypus novemcinctus ENSDNOG00000005093 I 0.884
ENSDORG00000014121 Dipodomys ordii ENSDORG00000014121 I 0.884
ARNT Equus caballus ENSECAG00000009602 I 0.884
ARNT Erinaceus europaeus ENSEEUG00000007500 I 0.884
ARNT Echinops telfairi ENSETEG00000001280 I 0.884
ARNT Felis catus ENSFCAG00000003644 I 0.884
ARNT Homo sapiens ENSG00000143437 D 0.884
arnt Gasterosteus aculeatus ENSGACG00000011686 I 0.884
ARNT Gallus gallus ENSGALG00000000751 I 0.884
ARNT Gorilla gorilla ENSGGOG00000015383 I 0.884
ENSGMOG00000006058 Gadus morhua ENSGMOG00000006058 I 0.884
ENSLACG00000013911 Latimeria chalumnae ENSLACG00000013911 I 0.884
ARNT Loxodonta africana ENSLAFG00000011282 I 0.884
ENSMEUG00000003050 Macropus eugenii ENSMEUG00000003050 I 0.884
ARNT Meleagris gallopavo ENSMGAG00000000943 I 0.884
ARNT Microcebus murinus ENSMICG00000005872 I 0.884
ARNT Myotis lucifugus ENSMLUG00000003502 I 0.884
ARNT Macaca mulatta ENSMMUG00000000541 I 0.884
ARNT Monodelphis domestica ENSMODG00000018814 I 0.884
ENSMPUG00000004365 Mustela putorius furo ENSMPUG00000004365 I 0.884
Arnt Mus musculus ENSMUSG00000015522 D 0.884
ENSNLEG00000009971 Nomascus leucogenys ENSNLEG00000009971 I 0.884
ARNT Ornithorhynchus anatinus ENSOANG00000004580 I 0.884
ENSOARG00000020870 Ovis aries ENSOARG00000020870 I 0.884
ARNT Oryctolagus cuniculus ENSOCUG00000013582 I 0.884
ARNT Otolemur garnettii ENSOGAG00000004523 I 0.884
ENSONIG00000006431 Oreochromis niloticus ENSONIG00000006431 I 0.884
ARNT Ochotona princeps ENSOPRG00000010374 I 0.884
ARNT Oryzias latipes ENSORLG00000010551 I 0.884
ENSPANG00000016773 Papio anubis ENSPANG00000016773 I 0.884
ARNT Procavia capensis ENSPCAG00000008485 I 0.884
ENSPFOG00000005237 Poecilia formosa ENSPFOG00000005237 I 0.884
ENSPPYG00000000888 Pongo abelii ENSPPYG00000000888 I 0.884
ENSPSIG00000008480 Pelodiscus sinensis ENSPSIG00000008480 I 0.884
ARNT Pan troglodytes ENSPTRG00000001266 I 0.884
ARNT Pteropus vampyrus ENSPVAG00000004354 I 0.884
Arnt Rattus norvegicus ENSRNOG00000031174 I 0.884
ENSSHAG00000012227 Sarcophilus harrisii ENSSHAG00000012227 I 0.884
ARNT Sus scrofa ENSSSCG00000006646 I 0.884
ENSSTOG00000013876 Ictidomys tridecemlineatus ENSSTOG00000013876 I 0.884
ARNT Taeniopygia guttata ENSTGUG00000004647 I 0.884
ARNT Tetraodon nigroviridis ENSTNIG00000008064 I 0.884
ARNT Takifugu rubripes ENSTRUG00000014504 I 0.884
ENSTSYG00000006074 Tarsius syrichta ENSTSYG00000006074 I 0.884
ARNT Tursiops truncatus ENSTTRG00000007388 I 0.884
ARNT Vicugna pacos ENSVPAG00000005439 I 0.884
ENSXMAG00000016545 Xiphophorus maculatus ENSXMAG00000016545 I 0.884
GA11313 Drosophila pseudoobscura FBgn0071367 I 0.884
GF18433 Drosophila ananassae FBgn0095451 I 0.884
GG17399 Drosophila erecta FBgn0109625 I 0.884
GH18221 Drosophila grimshawi FBgn0125689 I 0.884
GI10175 Drosophila mojavensis FBgn0132941 I 0.884
GL12493 Drosophila persimilis FBgn0150099 I 0.884
GM26289 Drosophila sechellia FBgn0181143 I 0.884
GD20825 Drosophila simulans FBgn0192287 I 0.884
GJ10876 Drosophila virilis FBgn0198144 I 0.884
GK11420 Drosophila willistoni FBgn0213431 I 0.884
GE24803 Drosophila yakuba FBgn0241904 I 0.884
tgo Drosophila melanogaster FBgn0264075 D 0.884
HMEL013329 Heliconius melpomene HMEL013329 I 0.884
ISCW023999 Ixodes scapularis ISCW023999 I 0.884
KGM_04621 Danaus plexippus KGM_04621 I 0.884
MCINX011636 Melitaea cinxia MCINX011636 I 0.884
NV11924 Nasonia vitripennis NV11924 I 0.884
PHUM505970 Pediculus humanus PHUM505970 I 0.884
RPRC004351 Rhodnius prolixus RPRC004351 I 0.884
SINV17691 Solenopsis invicta SINV17691 I 0.884
SPU_000129 Strongylocentrotus purpuratus SPU_000129 I 0.884
TC004710 Tribolium castaneum TC004710 I 0.884
Afo_R007655 Aptenodytes forsteri Afo_R007655 I 0.884
Alligator_sinensis_CCG020663.1 Alligator sinensis Alligator_sinensis_CCG020663.1 I 0.884
Cmyd_10007604 Chelonia mydas Cmyd_10007604 I 0.884
ENSBTAP00000028023-D1 Bos grunniens ENSBTAP00000028023-D1 I 0.884
ENSP00000351407 Macaca fascicularis ENSP00000351407 I 0.884
Gfo_R011690 Geospiza fortis Gfo_R011690 I 0.884
Myotis_brandtii_ARNT_10031836 Myotis brandtii Myotis_brandtii_ARNT_10031836 I 0.884
Pvit_04978 Pogona vitticeps Pvit_04978 I 0.884
Tal_R007034 Tyto alba Tal_R007034 I 0.884
estExt_fgenesh2_pg.C_1460068 Branchiostoma floridae estExt_fgenesh2_pg.C_1460068 I 0.884
Sakowv30011795m.g Saccoglossus kowalevskii Sakowv30011795m.g I 0.884
CLEC002917 Cimex lectularius CLEC002917 I 0.884
CLEC012864 Cimex lectularius CLEC012864 I 0.884
HHAL008564-PA Halyomorpha halys HHAL008564-PA I 0.884
HHAL009348-PA Halyomorpha halys HHAL009348-PA I 0.884
LCUP007387 Lucilia cuprina LCUP007387 I 0.884
LDEC004670 Leptinotarsa decemlineata LDEC004670 I 0.884
arnt.L Xenopus laevis XB-GENE-17346408 I 0.884
arnt Xenopus tropicalis XB-GENE-855450 I 0.884
arnt.S Xenopus laevis XB-GENE-866594 I 0.884
AATE014785 Anopheles atroparvus AATE014785 I 0.884
ADIR005096 Anopheles dirus ADIR005096 I 0.884
AEPI009051 Anopheles epiroticus AEPI009051 I 0.884
AFAF016726 Anopheles farauti AFAF016726 I 0.884
AFUN000829 Anopheles funestus AFUN000829 I 0.884
AMEC017008 Anopheles melas AMEC017008 I 0.884
AQUA011339 Anopheles quadriannulatus AQUA011339 I 0.884
LLOJ003291 Lutzomyia longipalpis LLOJ003291 I 0.884
MDOA015409 Musca domestica MDOA015409 I 0.884
ARNT Sorex araneus ENSSARG00000005490 I 0.873
ENSAMXG00000012473 Astyanax mexicanus ENSAMXG00000012473 I 0.860
tetur01g08330 Tetranychus urticae tetur01g08330 I 0.858
Ocbimv22015061m.g Octopus bimaculoides Ocbimv22015061m.g I 0.858
SMU15010696 Schmidtea mediterranea SMU15010696 I 0.858
BGLB009342 Biomphalaria glabrata BGLB009342 I 0.858
PXEA_0001988401 Protopolystoma xenopodis PXEA_0001988401 I 0.858
ACYPI008301 Acyrthosiphon pisum ACYPI008301 N 0.846
CapteG88605 Capitella teleta CapteG88605 I 0.838
CapteG88932 Capitella teleta CapteG88932 I 0.838
CGI_10017200 Crassostrea gigas CGI_10017200 I 0.838