CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Figla
(
Rattus norvegicus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSRNOG00000015877
T037215_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Figla
M01737_2.00
Mus musculus
NNCASSTGN
NCASSTGNN
PBM
Weirauch et al.(2014)
pTH5105
0.914
0.962
FIGLA
M02805_2.00
Homo sapiens
HMCACCTGKN
NMCAGGTGKD
SELEX
Jolma et al.(2013)
FIGLA_1
0.890
0.923
FIGLA
M04205_2.00
Homo sapiens
HMCACCTGB
VCAGGTGKD
SELEX
Yin et al.(2017)
FIGLA_eDBD_HT-SELEX
0.890
0.923
FIGLA
M04206_2.00
Homo sapiens
HMCACCTGK
MCAGGTGKD
SELEX
Yin et al.(2017)
FIGLA_eDBD_Methyl-HT-SELEX
0.890
0.923
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000021272
bHLH
61
113
RRRVANAKERERIKNLNRGFAKLKALVPFLPQSRKPSKVDILKGATEYIRILG
Links
Other
bHLH
family TFs
Other
Rattus norvegicus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00227.1
Alternaria brassicicola
AB00227.1
N
COCC4DRAFT_126514
Bipolaris maydis
COCC4DRAFT_126514
N
COCCADRAFT_6511
Bipolaris zeicola
COCCADRAFT_6511
N
COCMIDRAFT_95122
Bipolaris oryzae
COCMIDRAFT_95122
N
COCVIDRAFT_112226
Bipolaris victoriae
COCVIDRAFT_112226
N
estExt_fgenesh1_pg.C_10450
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_10450
N
LEMA_P079040.1
Leptosphaeria maculans
LEMA_P079040.1
N
PTRG_09831
Pyrenophora triticirepentis
PTRG_09831
N
PTT_03590
Pyrenophora teres
PTT_03590
N
SNOG_10725
Stagonospora nodorum
SNOG_10725
N