CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Figla
(
Mus musculus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMUSG00000030001
T035701_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of transcription regulator complex. Is expressed in follicle cell of primary follicle; oocyte of primary follicle; oocyte of secondary follicle; and ovary. Human ortholog(s) of this gene implicated in primary ovarian insufficiency 6. Orthologous to human FIGLA (folliculogenesis specific bHLH transcription factor). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Figla
M01737_2.00
Mus musculus
NNCASSTGN
NCASSTGNN
PBM
Weirauch et al.(2014)
pTH5105
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FIGLA
M02805_2.00
Homo sapiens
HMCACCTGKN
NMCAGGTGKD
SELEX
Jolma et al.(2013)
FIGLA_1
0.890
0.923
FIGLA
M04205_2.00
Homo sapiens
HMCACCTGB
VCAGGTGKD
SELEX
Yin et al.(2017)
FIGLA_eDBD_HT-SELEX
0.890
0.923
FIGLA
M04206_2.00
Homo sapiens
HMCACCTGK
MCAGGTGKD
SELEX
Yin et al.(2017)
FIGLA_eDBD_Methyl-HT-SELEX
0.890
0.923
For this family, TFs with SR scores >
0.838
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01737_2.00
bHLH
15
67
RRRVANAKERERIKNLNRGFAKLKALVPFLPQSKKPSKVDILKGATEYIQILG
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000032070
bHLH
60
112
RRRVANAKERERIKNLNRGFAKLKALVPFLPQSKKPSKVDILKGATEYIQILG
Links
Other
bHLH
family TFs
Other
Mus musculus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FIGLA
Otolemur garnettii
ENSOGAG00000030530
I
0.914
Figla
Rattus norvegicus
ENSRNOG00000015877
I
0.914
FIGLA
Myotis lucifugus
ENSMLUG00000017374
I
0.914
FIGLA
Echinops telfairi
ENSETEG00000011908
I
0.894
ENSPANG00000010751
Papio anubis
ENSPANG00000010751
I
0.890
FIGLA
Oryctolagus cuniculus
ENSOCUG00000017295
I
0.890
ENSNLEG00000010223
Nomascus leucogenys
ENSNLEG00000010223
I
0.890
ENSPPYG00000012320
Pongo abelii
ENSPPYG00000012320
I
0.890
FIGLA
Tursiops truncatus
ENSTTRG00000011308
I
0.890
FIGLA
Pteropus vampyrus
ENSPVAG00000013376
I
0.890
FIGLA
Pan troglodytes
ENSPTRG00000012033
I
0.890
ENSPPYG00000012737
Pongo abelii
ENSPPYG00000012737
I
0.890
ENSMPUG00000007271
Mustela putorius furo
ENSMPUG00000007271
I
0.890
FIGLA
Macaca mulatta
ENSMMUG00000020852
I
0.890
ENSDNOG00000019277
Dasypus novemcinctus
ENSDNOG00000019277
I
0.890
ENSCSAG00000015178
Chlorocebus sabaeus
ENSCSAG00000015178
I
0.890
ENSAMEG00000015931
Ailuropoda melanoleuca
ENSAMEG00000015931
I
0.890
FIGLA
Homo sapiens
ENSG00000183733
D
0.890
FIGLA
Gorilla gorilla
ENSGGOG00000003953
I
0.890
ENSSTOG00000007556
Ictidomys tridecemlineatus
ENSSTOG00000007556
I
0.879
FIGLA
Sus scrofa
ENSSSCG00000008321
I
0.879
FIGLA
Equus caballus
ENSECAG00000024203
I
0.879
Figla
Dipodomys ordii
ENSDORG00000000358
I
0.870
FIGLA
Loxodonta africana
ENSLAFG00000010827
I
0.870
FIGLA
Cavia porcellus
ENSCPOG00000027561
I
0.860
FIGLA
Bos taurus
ENSBTAG00000008905
I
0.858