CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hes6
(
Rattus norvegicus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSRNOG00000020194
T037223_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HES6
M04139_2.00
Homo sapiens
DACACGTGCC
GGCACGTGTH
SELEX
Yin et al.(2017)
HES6_FL_HT-SELEX
0.857
0.959
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000063598
bHLH
37
86
QARKPLVEKKRRARINESLQELRLLLAGTEVQAKLENAEVLELTVRRVQG
ENSRNOP00000073966
bHLH
26
76
RKARKPLVEKKRRARINESLQELRLLLAGTEVQAKLENAEVLELTVRRVQG
Links
Other
bHLH
family TFs
Other
Rattus norvegicus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP14860
Atta cephalotes
ACEP14860
N
ASIM_0001177701
Anisakis simplex
ASIM_0001177701
N
augustus_masked-nMf.1.1.scaf19173-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf19173-processed-gene-0.0
N
EEL_0001074901
Elaeophora elaphi
EEL_0001074901
N
GPLIN_000819200
Globodera pallida
GPLIN_000819200
N
GPUH_0000809301
Gongylonema pulchrum
GPUH_0000809301
N
GPUH_0002358201
Gongylonema pulchrum
GPUH_0002358201
N
L892_g7302
Steinernema scapterisci
L892_g7302
N
LOAG_15212
Loa loa
LOAG_15212
N
nAv.1.0.1.g03526
Acanthocheilonema viteae
nAv.1.0.1.g03526
N
nOo.2.0.1.g06132
Onchocerca ochengi
nOo.2.0.1.g06132
N
Ocbimv22011176m.g
Octopus bimaculoides
Ocbimv22011176m.g
N
OESDEN_08744
Oesophagostomum dentatum
OESDEN_08744
N
Ogr10463
Ophisaurus gracilis
Ogr10463
N
PEQ_0000073901
Parascaris equorum
PEQ_0000073901
N
RPRC011887
Rhodnius prolixus
RPRC011887
N
YQE_11979
Dendroctonus ponderosae
YQE_11979
N