CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0000809301
(
Gongylonema pulchrum
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
GPUH_0000809301
T159633_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0000809301-mRNA-1
C2HC ZF
59
87
RCTTPGCTGKGHVNSNRTSHRSLSGCPIA
Links
Other
C2HC ZF
family TFs
Other
Gongylonema pulchrum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_15212
Loa loa
LOAG_15212
N
1.000
ASIM_0001177701
Anisakis simplex
ASIM_0001177701
N
1.000
EEL_0001074901
Elaeophora elaphi
EEL_0001074901
N
1.000
nAv.1.0.1.g03526
Acanthocheilonema viteae
nAv.1.0.1.g03526
N
1.000
nOo.2.0.1.g06132
Onchocerca ochengi
nOo.2.0.1.g06132
N
1.000
OESDEN_08744
Oesophagostomum dentatum
OESDEN_08744
N
1.000
PEQ_0000073901
Parascaris equorum
PEQ_0000073901
N
1.000
L892_g7302
Steinernema scapterisci
L892_g7302
N
0.931
Ogr10463
Ophisaurus gracilis
Ogr10463
N
0.862
SNAPOd2T00023082001
Oikopleura dioica
SNAPOd2T00023082001
N
0.828
SNAPOd2T00028278001
Oikopleura dioica
SNAPOd2T00028278001
N
0.828
GPLIN_000819200
Globodera pallida
GPLIN_000819200
N
0.828
L898_g7817
Steinernema monticolum
L898_g7817
N
0.828
MhA1_Contig653.frz3.gene3
Meloidogyne hapla
MhA1_Contig653.frz3.gene3
N
0.793
ACEP14860
Atta cephalotes
ACEP14860
N
0.759
A_08344
Schistosoma haematobium
A_08344
N
0.759
TsM_000155300
Taenia solium
TsM_000155300
N
0.759
RPRC011887
Rhodnius prolixus
RPRC011887
N
0.724
YQE_11979
Dendroctonus ponderosae
YQE_11979
N
0.724
Sjc_0121660
Schistosoma japonicum
Sjc_0121660
N
0.708