CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig653.frz3.gene3
(
Meloidogyne hapla
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
MhA1_Contig653.frz3.gene3
T159652_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig653.frz3.gene3
C2HC ZF
11
39
RCTYPGCDGRGHVNSSRNSHRSLSGCPVA
Links
Other
C2HC ZF
family TFs
Other
Meloidogyne hapla
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_000819200
Globodera pallida
GPLIN_000819200
N
0.897
augustus_masked-nMf.1.1.scaf19173-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf19173-processed-gene-0.0
N
0.824
LOAG_15212
Loa loa
LOAG_15212
N
0.793
Ogr10463
Ophisaurus gracilis
Ogr10463
N
0.793
ASIM_0001177701
Anisakis simplex
ASIM_0001177701
N
0.793
EEL_0001074901
Elaeophora elaphi
EEL_0001074901
N
0.793
GPUH_0000809301
Gongylonema pulchrum
GPUH_0000809301
N
0.793
nAv.1.0.1.g03526
Acanthocheilonema viteae
nAv.1.0.1.g03526
N
0.793
nOo.2.0.1.g06132
Onchocerca ochengi
nOo.2.0.1.g06132
N
0.793
OESDEN_08744
Oesophagostomum dentatum
OESDEN_08744
N
0.793
PEQ_0000073901
Parascaris equorum
PEQ_0000073901
N
0.793
RPRC011887
Rhodnius prolixus
RPRC011887
N
0.759
YQE_11979
Dendroctonus ponderosae
YQE_11979
N
0.759
L892_g7302
Steinernema scapterisci
L892_g7302
N
0.759
GPUH_0002358201
Gongylonema pulchrum
GPUH_0002358201
N
0.737
ACEP14860
Atta cephalotes
ACEP14860
N
0.724
Ocbimv22011176m.g
Octopus bimaculoides
Ocbimv22011176m.g
N
0.724