CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYC
(
Tupaia belangeri
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTBEG00000005715
T037581_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Myc
M08751_2.00
Mus musculus
GVSCACGTGGNN
NNCCACGTGSBC
Misc
Kulakovskiy et al.(2013)
MYC_MOUSE.H11MO.0.A
0.898
0.987
Myc
M09467_2.00
Mus musculus
SCACGTGSNN
NNSCACGTGS
Misc
Heinz et al.(2010)
mES-cMyc_GSE11431
0.898
0.987
MYC
M08054_2.00
Homo sapiens
NNSCACGTGGNN
NNCCACGTGSNN
ChIP-seq
Mathelier et al.(2014)
MA0147.3
0.846
0.960
MYC
M07799_2.00
Homo sapiens
VNSCACGTGG
CCACGTGSNB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CMYC_Stanford
0.846
0.960
MYC
M07800_2.00
Homo sapiens
NNSCACGTGGB
VCCACGTGSNN
ChIP-seq
Gerstein et al.(2012)
HepG2_CMYC_UT-A
0.846
0.960
MYC
M07801_2.00
Homo sapiens
VNVCACGTGGN
NCCACGTGBNB
ChIP-seq
Gerstein et al.(2012)
K562_CMYC_Stanford
0.846
0.960
MYC
M07802_2.00
Homo sapiens
VSCRCGTGBNB
VNVCACGYGSB
ChIP-seq
Gerstein et al.(2012)
K562_CMYC_UT-A
0.846
0.960
MYC
M07803_2.00
Homo sapiens
CACGTGSH
DSCACGTG
ChIP-seq
Gerstein et al.(2012)
MCF-7_CMYC_UT-A
0.846
0.960
MYC
M07804_2.00
Homo sapiens
NSCACGTGKBN
NVMCACGTGSN
ChIP-seq
Gerstein et al.(2012)
NB4_CMYC_Stanford
0.846
0.960
MYC
M08729_2.00
Homo sapiens
VNVCACRTGGN
NCCAYGTGBNB
Misc
Kulakovskiy et al.(2013)
MYC_HUMAN.H11MO.0.A
0.846
0.960
MYC
M09457_2.00
Homo sapiens
CACGTGSN
NSCACGTG
Misc
Heinz et al.(2010)
LNCAP-cMyc_Unpublished
0.846
0.960
MYC
M09850_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYC_01
0.846
0.960
MYC
M09851_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYC_02
0.846
0.960
MYC
M09852_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYC_Q3
0.846
0.960
MYC
M09853_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYC_Q6_01
0.846
0.960
MYC
M09854_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYC_02
0.846
0.960
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000004902
bHLH
360
412
KRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQ
ENSTBEP00000004902
bHLH
421
442
EKDLLRKRREQLKHKLEQLRNS
Links
Other
bHLH
family TFs
Other
Tupaia belangeri
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA025973
Oryza indica
BGIOSGA025973
N
BRADI1G24140
Brachypodium distachyon
BRADI1G24140
N
GRMZM2G081782
Zea mays
GRMZM2G081782
N
LPERR07G16580
Leersia perrieri
LPERR07G16580
N
MLOC_52196
Hordeum vulgare
MLOC_52196
N
OGLUM07G19030
Oryza glumaepatula
OGLUM07G19030
N
OLONG_002240
Oryza longistaminata
OLONG_002240
N
ONIVA07G17600
Oryza nivara
ONIVA07G17600
N
ORGLA07G0246500
Oryza glaberrima
ORGLA07G0246500
N
ORUFI07G20030
Oryza rufipogon
ORUFI07G20030
N
OS07G0569700
Oryza sativa
OS07G0569700
N
Pavir.Ba00594
Panicum virgatum
Pavir.Ba00594
N
Pavir.J03938
Panicum virgatum
Pavir.J03938
N
Sb02g036840
Sorghum bicolor
Sb02g036840
N
Si030697m.g
Setaria italica
Si030697m.g
N
Traes_2AS_E9A1F35CB
Triticum aestivum
Traes_2AS_E9A1F35CB
N
Traes_2BS_67D862F4A
Triticum aestivum
Traes_2BS_67D862F4A
N
Traes_2DS_2CE71025C
Triticum aestivum
Traes_2DS_2CE71025C
N
TRIUR3_28482
Triticum urartu
TRIUR3_28482
N